Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3382 |
Symbol | |
ID | 1185041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3823856 |
End bp | 3824161 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637394733 |
Product | lipoprotein, putative |
Protein accession | NP_793165 |
Protein GI | 28870546 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0486545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTCG ACAAGCGTCT CTGTGCCATC CTTGGTCTGA GTCTGGGCTG CTCTTTTGCG TACGCCAGAG ACTTGAATCA GGATGAAGCG CTCAGTTTGC GGCAGCGCGG TGTCATTCTT CCGCTCGAGC AGTTCATCGA GCGCGCGTTG AGGCTTCATC CGGGTGCCCG CTTGCTGGAA GCCGAGCTTG AAGAGAAAAA CAACATGTAC GTTTACGAGT TTGAATTGTT GACCCCGCAA GGCGTGGTCC GCGAGCTTAA ATTCGATGCG AGCAGCAGCA AACTGCTGAA AGACGAGGAT GATTGA
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Protein sequence | MKVDKRLCAI LGLSLGCSFA YARDLNQDEA LSLRQRGVIL PLEQFIERAL RLHPGARLLE AELEEKNNMY VYEFELLTPQ GVVRELKFDA SSSKLLKDED D
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