Gene PSPTO_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3377 
SymbolnuoN 
ID1185036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3817330 
End bp3818799 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content60% 
IMG OID637394728 
ProductNADH dehydrogenase I, N subunit 
Protein accessionNP_793160 
Protein GI28870541 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGA CGATTCAACA CTTTATTGCG CTTGCGCCAC TGCTGATTAC CAGCCTCACC 
GTTGTTGTGG TGATGCTGGC GATTGCATGG CGCCGCAATC ACTCGCAAAC GTTCCTGCTT
TCAGTAGCAG GCCTCAACCT GGCTCTTCTG TCGATTTACC CGGCCCTCAA AGTTGCACCG
CTGGTGGTGA CACCGCTGCT GCACATCGAC AACTTCGCCT GCCTGTACAT GGCGATCATT
CTGGCCTCGA CGCTGGCCTG CGTGACCATG GCGCACGCCT ACCTGGGTGA TGGCAAGGTT
GGCTATCCGG GCAACCGCGA AGAGCTTTAT CTGCTGATCC TGCTGGCCGC CGCCGGCGGT
CTGGTGCTGG TCAGCGCTCA GCATCTGGCT GGCCTGTTCA TTGGCCTGGA GTTGCTGTCG
GTGCCGGTCT ACGGGCTGGT GGCTTATGCT TTCTTCAACA AGCGCTCTCT GGAAGGCGGC
ATCAAATACA TGGTGCTGTC GGCCGCTGGC TCGGCATTTC TGCTGTTCGG CATGGCGTTG
TTGTACGCAG AAGCAGGTTC TCTGAGCTTT GAGGGTATCG GCAAGGCCAT CGCTGCTACC
GGCATGCCAA GCCCGATTGC CACGGTCGGT CTGGGCATGA TGGTTGTCGG CCTCGCCTTC
AAATTGTCGC TGGTGCCGTT CCACCTGTGG ACACCAGACG TCTACGAAGG CGCCCCTGCT
CCGGTCGCAG CGTTCCTGGC CACTGCGAGC AAGGTGGCCG TGTTTGCGGT ACTGGTGCGT
CTGTTCCAGA TTTCTCCGGC GGCCAGCAGT GGTGTATTGC ACGACGTGAT GGCGGTGATT
GCCGTGGCAT CGATTCTGGT CGGCAACCTG CTGGCGCTGA CCCAGACCAA CCTCAAGCGT
CTGCTGGGTT ATTCGTCCAT TGCACACTTC GGTTACCTGA TGATTGCGCT GGTGGCCAGC
AAAGGCATGG CAGTCGAGGC GATTGGCGTC TATCTGGCGA CCTACGTGCT GACCTCGCTG
GGCAGCTTCG GCGTGATTAC CATGATGTCT TCGCCTTACA GCGGACGTGA TGCCGATGCG
ATGTTCGAAT ACCGCGGGCT GTTCTGGCGT CGTCCGTACC TGACCGCAGT CATGACCCTG
ATGATGCTGT CGCTGGCCGG TATTCCGCTC ACTGCAGGCT TCATCGGCAA GTTCTACATC
ATTGCCACCG GCGTTGAATC ACAACTGTGG TGGCTGATCG GAGCCCTGGT GATCGGCAGC
GCCATTGGCG TCTTCTACTA CCTGCGCGTC ATGGTCACCA TGTACCTGGT CGACAACAAG
TTGCCGCGTC ACGACGCAGC GATCAACTGG GCACAGCGCA CTGGCGGCGT CATGCTGCTG
GCGGTCGCGA TCCTCACCTT CGTACTGGGT GTGTATCCAC AACCGCTGCT CGATCTGGTG
GTCAATGCCG GTCTGCACGC AGCAGGCTGA
 
Protein sequence
MDLTIQHFIA LAPLLITSLT VVVVMLAIAW RRNHSQTFLL SVAGLNLALL SIYPALKVAP 
LVVTPLLHID NFACLYMAII LASTLACVTM AHAYLGDGKV GYPGNREELY LLILLAAAGG
LVLVSAQHLA GLFIGLELLS VPVYGLVAYA FFNKRSLEGG IKYMVLSAAG SAFLLFGMAL
LYAEAGSLSF EGIGKAIAAT GMPSPIATVG LGMMVVGLAF KLSLVPFHLW TPDVYEGAPA
PVAAFLATAS KVAVFAVLVR LFQISPAASS GVLHDVMAVI AVASILVGNL LALTQTNLKR
LLGYSSIAHF GYLMIALVAS KGMAVEAIGV YLATYVLTSL GSFGVITMMS SPYSGRDADA
MFEYRGLFWR RPYLTAVMTL MMLSLAGIPL TAGFIGKFYI IATGVESQLW WLIGALVIGS
AIGVFYYLRV MVTMYLVDNK LPRHDAAINW AQRTGGVMLL AVAILTFVLG VYPQPLLDLV
VNAGLHAAG