Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3373 |
Symbol | nuoJ |
ID | 1185032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3813086 |
End bp | 3813595 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394724 |
Product | NADH dehydrogenase I, J subunit |
Protein accession | NP_793156 |
Protein GI | 28870537 |
COG category | [C] Energy production and conversion |
COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTCG CTTTCTACTT CGCATCCGGA ATCGCTGTTG TGTCCACCCT GCGGGTGATC ACCAACACCA ATCCGGTGCA TGCCCTGCTC TACCTGATCA TTTCGCTGAT CGCTGTAGCC ATGACCTTTT TCAGCCTCGG CGCGCCATTT GCCGGGGTAC TGGAAGTCAT CGCCTATGCG GGCGCGATCA TGGTCCTGTT CGTCTTCGTG GTCATGATGC TGAACCTGGG CCCGGCCTCG GTTCAGCAGG AGCGCGCCTG GCTCAAACCC GGCATATGGA TTGGCCCGGT GATTCTCGGC ACGCTGTTGC TGGCCGAGCT GCTGTACGTC CTGTTCGCCA ATCCGACCGG CGCTGCCATC GGTCACACCA CGGTCGACGC CAAGGCGGTC GGCATCAGCC TGTTCGGGCC TTATCTGCTG GTGGTGGAAC TCGCCTCGAT GCTGCTGCTC GCTGCAGCCA TCACGGCATT CCATCTGGGC CGCAACGAGG CCAAGGAGCC AAGCCAATGA
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Protein sequence | MEFAFYFASG IAVVSTLRVI TNTNPVHALL YLIISLIAVA MTFFSLGAPF AGVLEVIAYA GAIMVLFVFV VMMLNLGPAS VQQERAWLKP GIWIGPVILG TLLLAELLYV LFANPTGAAI GHTTVDAKAV GISLFGPYLL VVELASMLLL AAAITAFHLG RNEAKEPSQ
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