| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3369 |
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| Symbol | nuoF |
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| ID | 1185028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3807298 |
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| End bp | 3808656 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394720 |
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| Product | NADH dehydrogenase I, F subunit |
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| Protein accession | NP_793152 |
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| Protein GI | 28870533 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCA CGTCCTTCGG CCCTGCCAAC CGCATTGCGC GCACGGCAGA AACCCATCCG
CTGACCTGGC GTTTGCGCGA TGACGGCGAG CCGGTCTGGC TCGACGAGTA TCAGACCAAA
GACGGCTATG CGGCGGCGCG CAAGGCGCTG ACCCAGCAGG CCCCTGACGA TATCGTCCAG
TCGGTCAAGG ACTCCGGCCT CAAGGGTCGC GGCGGTGCGG GCTTCCCCAC CGGCGTGAAG
TGGGGCCTGA TGCCCAAAGA CGAATCCATG AACATCCGCT ACCTGCTATG CAACGCGGAC
GAGATGGAGC CCAACACCTG GAAAGACCGC ATGTTGATGG AGCAACTGCC CCATCTGCTG
ATTGAGGGCA TGCTGATCAG TGCCCGCGCC CTGAAAGCCT ATCGCGGCTA TATCTTCCTG
CGTGGCGAAT ACGTGACGGC AGCGAAGCAC TTGAACCGTG CCGTGGCTGA AGCCAAGGCC
GCCGGTTTGC TGGGCAAGAA CATTCTTGGC ACCGGCTTCG ATTTCGAGCT GTTCGTGCAC
ACCGGCGCCG GTCGTTACAT CTGCGGTGAA GAAACCGCAC TGATCAACTC GCTGGAAGGT
CGCCGCGCCA ACCCCCGCTC CAAGCCGCCC TTCCCTGCTG CGGTAGGCGT GTGGGGCAAG
CCGACCTGTG TCAACAACGT CGAAACCCTG TGCAACGTGC CGGCCATCGT CAACAACGGC
AACGACTGGT ACAAGTCGCT GGCTCGCGAA GGCAGTGAAG ATCACGGCAC CAAGCTGATG
GGCTTCTCCG GCAAGGTGAA AAACCCTGGC CTGTGGGAGC TGCCGTTTGG TGTTCAGGCC
CGCGAACTGT TCGAAGACTA CGCCGGTGGC ATGCGCGACG GCTTCACACT CAAGTGCTGG
CAGCCCGGTG GTGCAGGGAC TGGTTTCCTG TTGCCGGAGC ACCTGGACGC GCAGATGTAC
GCAGGCGGTA TCGCCAAGGT TGGCACCCGG ATGGGCACAG GCCTGGCAAT GGCCGTCGAC
GACTCGGTCA ACATGGTATC GCTGCTGCGC AACATGGAAG AGTTCTTCGC TCAGGAGTCC
TGTGGCTTCT GCACCCCATG TCGCGATGGC CTGCCATGGA GCGTGAAAAT ACTGCGTGCC
ATCGAGAACG GTCACGGCCA GCCGGGTGAT ATCGAAACCC TGCTCGGCCT AGTCAACTTC
CTCGGCCCTG GCAAGACGTT CTGTGCTCAT GCACCAGGTG CCGTTGAACC GTTGGGCAGT
GCGATCAAGT ATTTCCGTTC GGAGTTCGAA GCCGGTATTG CGCCCGCCAG CGCAGCCATG
CTTGTTCCGG GTAAAAGTCC GACCGTGGTC GGCGCATAA
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| Protein sequence | MTITSFGPAN RIARTAETHP LTWRLRDDGE PVWLDEYQTK DGYAAARKAL TQQAPDDIVQ
SVKDSGLKGR GGAGFPTGVK WGLMPKDESM NIRYLLCNAD EMEPNTWKDR MLMEQLPHLL
IEGMLISARA LKAYRGYIFL RGEYVTAAKH LNRAVAEAKA AGLLGKNILG TGFDFELFVH
TGAGRYICGE ETALINSLEG RRANPRSKPP FPAAVGVWGK PTCVNNVETL CNVPAIVNNG
NDWYKSLARE GSEDHGTKLM GFSGKVKNPG LWELPFGVQA RELFEDYAGG MRDGFTLKCW
QPGGAGTGFL LPEHLDAQMY AGGIAKVGTR MGTGLAMAVD DSVNMVSLLR NMEEFFAQES
CGFCTPCRDG LPWSVKILRA IENGHGQPGD IETLLGLVNF LGPGKTFCAH APGAVEPLGS
AIKYFRSEFE AGIAPASAAM LVPGKSPTVV GA
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