Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3368 |
Symbol | nuoE |
ID | 1185027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3806804 |
End bp | 3807301 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394719 |
Product | NADH dehydrogenase I, E subunit |
Protein accession | NP_793151 |
Protein GI | 28870532 |
COG category | [C] Energy production and conversion |
COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGCC CGCTGATTCA GACTGACCGT TTCGTCTTGA GCGAAACCGA GCGCTCGGCC ATCGAGCACG AGCTGCACCA CTACGAAGAC CCGCGTGCGG CGTCCATCGA AGCCCTGAAA ATCGTTCAGA AAGAACGTGG CTGGGTGCCC GACGGTGCCA TCTACGCCAT AGGCGATCTG CTGGGCATAC CTGCCAGTGA CGTCGAAGGC GTTGCTACGT TCTACAGTCA GATTTTCCGC CAGCCAGTGG GACGTCACAT CATTCGCGTC TGCAACAGTA TGGTGTGCTT CATCGGCGGC CACGAAAACG TGGTGGACGA GATCAAGACC TCACTGGGCA TCGGCCTGGG GCAAACCACC GCTGACGGTC GTTTCACGTT GCTGCCGGTC TGCTGCCTGG GCAACTGCGA CAAAGCCCCG GCCGTCATGG TCGATGACGA CACTTTCGGC GATGTACAGC CTGCTACCGT TGCCAAAATG CTGGAGGGTT ACCTATGA
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Protein sequence | MNSPLIQTDR FVLSETERSA IEHELHHYED PRAASIEALK IVQKERGWVP DGAIYAIGDL LGIPASDVEG VATFYSQIFR QPVGRHIIRV CNSMVCFIGG HENVVDEIKT SLGIGLGQTT ADGRFTLLPV CCLGNCDKAP AVMVDDDTFG DVQPATVAKM LEGYL
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