| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3366 |
|---|
| Symbol | nuoB |
|---|
| ID | 1185025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3804271 |
|---|
| End bp | 3804945 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637394717 |
|---|
| Product | NADH dehydrogenase I, B subunit |
|---|
| Protein accession | NP_793149 |
|---|
| Protein GI | 28870530 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.381632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATATA ATCTCACCAG GATCGACCCG GACGCTCCTA ACGAGCAGTA CCCCATCGGC
AAGCGGGAAA CCGTTTCCGA TCCGTTAGAA GACCAAGTCC ACAAAAACAT CTACATGGGC
AAGCTGGAAG ACGTGCTGAA CGGTGCGGTC AACTGGGGGC GTAAAAACTC TCTGTGGCCC
TACAACTTCG GTCTGTCGTG CTGCTATGTG GAAATGACCA CCGCCTTCAC GGCGCCCCAT
GACATCGCAC GCTTTGGTGC CGAAGTCATC CGGGCATCGC CACGGCAGGC GGACTTTATG
GTTATTGCCG GTACCTGCTT CATCAAGATG GCGCCGATCA TCCAGCGTCT CTACGAGCAA
ATGCTCGAAC CCAAGTGGGT CATTTCCATG GGTTCGTGTG CCAACTCCGG TGGCATGTAC
GACATCTACT CAGTGGTCCA GGGGGTGGAC AAATTCCTTC CCGTGGATGT CTACGTGCCC
GGCTGCCCGC CCCGCCCCGA AGCTTTTCTG CAAGGCCTGA TGCTGCTGCA GGAATCCATC
GGCAAGGAGC GTCGCCCTCT TTCCTGGGTC GTCGGCGATC AAGGCGTATA CCGCGCCGAG
ATGCCATCGC AAAAGGAACA GCGCCGCGAA CAGCGTATTC AGGTGACCAA CCTGCGCAGC
CCCGACGAAG TCTGA
|
|---|
| Protein sequence | MQYNLTRIDP DAPNEQYPIG KRETVSDPLE DQVHKNIYMG KLEDVLNGAV NWGRKNSLWP
YNFGLSCCYV EMTTAFTAPH DIARFGAEVI RASPRQADFM VIAGTCFIKM APIIQRLYEQ
MLEPKWVISM GSCANSGGMY DIYSVVQGVD KFLPVDVYVP GCPPRPEAFL QGLMLLQESI
GKERRPLSWV VGDQGVYRAE MPSQKEQRRE QRIQVTNLRS PDEV
|
|---|
| |