| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3357 |
|---|
| Symbol | |
|---|
| ID | 1185016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3795436 |
|---|
| End bp | 3795882 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637394708 |
|---|
| Product | mutT/nudix family protein |
|---|
| Protein accession | NP_793140 |
|---|
| Protein GI | 28870521 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0573059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGC AAGCCCATGT TACCGTCGCC ACCATCGTCG AGGATCAGGG CCGTTTCCTG
TTCGTCGAGG AAATGAAAGG CGGCCGCGCC GTACTCAATC AACCTGCCGG GCATCTCGAC
CCGAATGAGA GCCTGCAACG TGCGGCAGTG CGGGAAACCC TGGAAGAAAC CGGCTGGGAC
GTCGAACTGA CCAGCGTGGT GGGTATTTAC CTGTACACCG CGCCAAGCAA TGGCGTGACC
TATCAGCGAA TCTGCTTCGC CGCCAAAGCC CTGCGCCACA ATTGTGAGTA TCAGCTGGAC
CACGGCATAC TCGGCGCGAT CTGGCTGACT CGCGACGAGT TGCTGGCTCA GCAGGAGCGC
TGGCGCAGCG AACTGGTCAT GCGCTGCCTC GACGATTACC TCGACGCCGA ACATTTCAGT
CTCGACCTGC TGCGCGACAA GGCGTGA
|
|---|
| Protein sequence | MTWQAHVTVA TIVEDQGRFL FVEEMKGGRA VLNQPAGHLD PNESLQRAAV RETLEETGWD
VELTSVVGIY LYTAPSNGVT YQRICFAAKA LRHNCEYQLD HGILGAIWLT RDELLAQQER
WRSELVMRCL DDYLDAEHFS LDLLRDKA
|
|---|
| |