| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3354 |
|---|
| Symbol | |
|---|
| ID | 1185013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 3791593 |
|---|
| End bp | 3791955 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637394705 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_793137 |
|---|
| Protein GI | 28870518 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2127] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.042088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCAT TCAGCAAGAT TCGACTAACA TTCAATCAGG ATGGTCCGCA GTCACACGAG
GACGACTCGG CAGGCATCGC GGTGCAGGAC GCCAAACCGA CCCTGCAGGC GCCACCGATG
TACAAGGTGG TTTTGTTCAA TGATGACTAC ACCCCGATGG ATTTCGTCGT CGAAGTGCTC
GAGGTGTTTT TTAACCTGAA TCGTGAGCTG GCCACCAAAG TCATGCTGGC CGTCCATACA
GAGGGACGGG CAGTCTGCGG ATTGTTTACC CGCGACATCG CCGAGACCAA GGCAGCGCAG
GTCAATCAAT ACGCCAGGGA GAGCCAGCAT CCGCTACTCT GTGAGATCGA GAAGGACGGT
TAA
|
|---|
| Protein sequence | MHAFSKIRLT FNQDGPQSHE DDSAGIAVQD AKPTLQAPPM YKVVLFNDDY TPMDFVVEVL
EVFFNLNREL ATKVMLAVHT EGRAVCGLFT RDIAETKAAQ VNQYARESQH PLLCEIEKDG
|
|---|
| |