Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3351 |
Symbol | |
ID | 1185010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3788145 |
End bp | 3788852 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394702 |
Product | hypothetical protein |
Protein accession | NP_793134 |
Protein GI | 28870515 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2935] Putative arginyl-tRNA:protein arginylyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.190221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGAGC TGGCAAGGCT GAAGTTTTAT GCCACTCAAC CCCACACCTG CAGTTACCTG CCCGAGGAGC AGGCGACGAC CCTGTTCCTG GACCCCAGCC AGCCGATGGA TGTACAGGTC TATGCGGACC TGTCGGACAT GGGCTTTCGC CGTAGCGGCG ATCATCTTTA CCGCCCTCAC TGCCAGAACT GCAGCGCTTG CGTGCCCGCG CGCATCCCTG TGAACCTGTT CGTACCTGAC AGACAGCAAA AGCGCATCCT CAAGCGTAAT GCCGACATTC AGGTAAGCAG CGCCAAACCG GTGTTCACTC AGGAGTATTT CGATCTTTAC CAGCGCTACA TCGAGCAGCG CCACGCCGAT GGCGACATGT TCCCCCCTAG TCGTGAGCAG TTTTCGACGT TTCTGGTTCG CGATCTGCCG TTTTCGCGCT TTTACGAATT TCGTGTTGAC CAACGCCTGC TGGCAGTCGC CGTTACCGAC CTGCTTCCCA ACGGCCTTTC TGCGGTCTAC ACCTTCTACG AACCTGACGA AGAGCGCCGC AGCCTGGGCC GCTACGCGAT TTTGTGGCAG ATCGGCGAAG CCACCCGGCT GCAACTGCAA GCGGTGTACC TGGGCTACTG GATAAAGAAC TGCAAAAAGA TGAATTACAA GACCCAATAT CGCCCCATCG AGCTACTGAC CAATCAAAGA TGGGTCACTC TGTATTGA
|
Protein sequence | MTELARLKFY ATQPHTCSYL PEEQATTLFL DPSQPMDVQV YADLSDMGFR RSGDHLYRPH CQNCSACVPA RIPVNLFVPD RQQKRILKRN ADIQVSSAKP VFTQEYFDLY QRYIEQRHAD GDMFPPSREQ FSTFLVRDLP FSRFYEFRVD QRLLAVAVTD LLPNGLSAVY TFYEPDEERR SLGRYAILWQ IGEATRLQLQ AVYLGYWIKN CKKMNYKTQY RPIELLTNQR WVTLY
|
| |