| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3345 |
|---|
| Symbol | serS |
|---|
| ID | 1185004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 3780801 |
|---|
| End bp | 3782081 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637394696 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | NP_793128 |
|---|
| Protein GI | 28870509 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0468703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATT CCAAACTGTT ACGTACTCAA CTTCAGGACG TAGCGGATCG CTTGGCTTCC
CGTGGCTTTA CACTGGATGT GGCGCGCATT GAATCGCTGG AAGCCCAGCG CAAGGTGGTG
CAGACCCGCA CCGAACAGCT TCAGGCCGAG CGCAATGCAC GTTCCAAGTC CATCGGTCAG
GCCAAGCAGC GCGGTGAGGA CATTGCGCCG TTGATGGCGG ATGTCGAGCG TATGGGCAAC
GAACTGAGCG AAGGCAAGGT CGAGCTGGAC GCCATCCAGG CCGAACTGGA CGCGCTGGTG
CTGAACATCC CGAACCTGCC TCACGAATCC GTGCCGGTGG GTGCCGACGA AGAAGGCAAC
GTCGAAGTCC GTCGCTGGGG CACGCCGACG GCGTTCGGCT TCGAGGTCAA GGATCACGTT
GCGCTGGGCG AGAAATTCGG CTGGCTGGAC TTTGAGACCG CAGCCAAACT GTCCGGCGCA
CGTTTTGCGT TGTTGCGTGG CCCGATCGCA CGTCTGCACC GCGCATTGGC GCAGTTCATG
ATCAACCTGC ACATCAACGA GCATGGCTAC GAAGAGACCT ACACGCCTTA TCTGGTGCAG
GCACCTGCAC TGCAAGGCAC GGGTCAGTTG CCGAAGTTCG AGGAAGACCT GTTCAAGATC
TCGCGTGAAG GCGAAGCTGA TCTGTACCTG ATCCCGACGG CTGAAGTGTC GCTGACCAAC
ATTGTGTCGG GCGAGATTCT CGATGCAAAA CAGCTGCCGC TCAAGTTCGT TGCGCACACG
CCGTGCTTCC GCAGCGAAGC GGGCGCGTCG GGCCGTGACA CCCGAGGGAT GATCCGTCAG
CACCAGTTCG ACAAGGTCGA GATGGTCCAG ATCGTTGCAC CGGACGATTC CATGGCGGCC
CTTGAATCGC TGACCGGTAA CGCCGAACGC GTTCTGCAAC TGCTGGAGCT GCCGTATCGC
ACGCTCGCGC TGTGCACCGG CGACATGGGT TTCAGCGCCG TGAAGACGTA CGACCTGGAA
GTGTGGATCC CCAGCCAGGA CAAGTACCGC GAAATCTCTT CGTGCTCCAA CTGCGGTGAT
TTTCAGGCGC GCCGCATGCA GGCTCGCTGG CGCAACCCGG AAACCGGCAA GCCGGAACTG
GTTCACACCC TCAACGGTTC GGGGTTGGCG GTAGGTCGTA CCCTGGTGGC CGTGCTGGAA
AACTATCAGC AGGCGGACGG TTCGATCCGC GTGCCGGAAG TGCTCAAACC GTACATGGGC
GGCCTTGAGG TTATCGGTTA A
|
|---|
| Protein sequence | MLDSKLLRTQ LQDVADRLAS RGFTLDVARI ESLEAQRKVV QTRTEQLQAE RNARSKSIGQ
AKQRGEDIAP LMADVERMGN ELSEGKVELD AIQAELDALV LNIPNLPHES VPVGADEEGN
VEVRRWGTPT AFGFEVKDHV ALGEKFGWLD FETAAKLSGA RFALLRGPIA RLHRALAQFM
INLHINEHGY EETYTPYLVQ APALQGTGQL PKFEEDLFKI SREGEADLYL IPTAEVSLTN
IVSGEILDAK QLPLKFVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ IVAPDDSMAA
LESLTGNAER VLQLLELPYR TLALCTGDMG FSAVKTYDLE VWIPSQDKYR EISSCSNCGD
FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPEVLKPYMG
GLEVIG
|
|---|
| |