| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3332 |
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| Symbol | |
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| ID | 1184990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3768937 |
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| End bp | 3770364 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394682 |
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| Product | alkaline metalloendoprotease |
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| Protein accession | NP_793115 |
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| Protein GI | 28870496 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAG TCAAAGAAAA TGCTGCAATT CAACTCTCCG CCGCTACCAG CACCTCATTC
GATCAGATCA ATACGTTTGC GCACGAGTAT GACCGTGGCG GTAACCTCAC GATCAACGGC
AAACCTTCGT ACTCGGTCGA TCAGGCTGCT AATTTCATTC TTCGCGATGA CGCCGCTTGG
GCGGATCGCG ACGGTAACGG CACCATCAAC CTCACGTATA CGTTCCTGAC CGCAAAACCT
GCCGGGTTCA ACAACGCCCT TGGGACTTTC AGTGCGTTCA ATGCGCAACA GAAAGCCCAA
GCGGTATTGT CGATGCAATC CTGGGCAGAC GTTGCCAAGG TCAGCTTTAC CCAAGCGGCT
TCCGGCGGCG ACGGGCATAT GACCTTTGGT AACTACAGTG ATGGCAGCAA TGGCGGGTCG
GCGTTTGCCT ACCTGCCGAG CGGCGGCCGT ACAGATGGTC AGTCCTGGTA CCTGATCAGC
GATTCTTACC GGCAAAACGT CTCCCCGGAC AACGGTAACT ATGGTCGTCA GACCCTGACC
CACGAAATCG GCCACACCCT GGGCCTGTCT CACCCTGGCG ACTACAACGC TGTTGACGGC
AACCCGACAT ACAAGGACGC AACCTACGCA GAAGACACGC GCGGCTACAG CGTCATGAGC
TACTGGAGTG AGTCCAATAC CGACCAGAAC TTCGTCAAGG GCGGCGCTTC GTCGTATTCC
TCGGCACCGT TGCTGGACGA TATTGCGGCT GTTCAGCAAC TCTACGGCGC GAACCTGAGC
ACGCGGGCCA CTGATACGGT CTACGGCTTC AACTCCACTG CCGGGCGCGA TTTCTACAGC
GCCACATCCG CCTCTTCCAA GGTGGTGTTT TCGGTGTGGG ATGGCGGGGG CAAGGATACC
CTCGACTTCT CCGGCTTCAC CCAGAACCAG AAAATCAACC TGAACGCGGC CTCGTTCTCT
GACGTCGGCG GCATGGTGGG TAACGTCTCC ATTGCCAAGG GCGTTGTGGT GGAAAACGCA
ATTGGGGGTT CGGGCAACGA TCTGTTGATC GGCAATGCTG CCGCCAACGA CCTCAAAGGC
GGTGCCGGCA ACGACATCAT CTACGGGGGT GGCGGCGCAG ACAGCCTCAC CGGCGGCGCA
GGCGCAGACA TTTTCGTGTT TGGCGCCAGT TCCGATTCCA ACCGTGCCGC TCAGGACACG
ATTCGCGATT TTGTCAGCGG TCAGGACAAG ATCGACGTAT CGGCTATCTC CACGCTGAGC
GCGTTGCAGT TCGTCAACGC CTTCAGCGGT CATGCTGGCG AAGCGATCCT GAACTACAAC
CAGAGCAGCA ACCTGGGTAG CCTGGCGATC GACTTCACCG GTCAGGGCGC TGGGGACTTT
CTGGTGGGAA CTGTTGGTCA AGCGTTTGCC ACTGATATCG TGGTTTAA
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| Protein sequence | MTKVKENAAI QLSAATSTSF DQINTFAHEY DRGGNLTING KPSYSVDQAA NFILRDDAAW
ADRDGNGTIN LTYTFLTAKP AGFNNALGTF SAFNAQQKAQ AVLSMQSWAD VAKVSFTQAA
SGGDGHMTFG NYSDGSNGGS AFAYLPSGGR TDGQSWYLIS DSYRQNVSPD NGNYGRQTLT
HEIGHTLGLS HPGDYNAVDG NPTYKDATYA EDTRGYSVMS YWSESNTDQN FVKGGASSYS
SAPLLDDIAA VQQLYGANLS TRATDTVYGF NSTAGRDFYS ATSASSKVVF SVWDGGGKDT
LDFSGFTQNQ KINLNAASFS DVGGMVGNVS IAKGVVVENA IGGSGNDLLI GNAAANDLKG
GAGNDIIYGG GGADSLTGGA GADIFVFGAS SDSNRAAQDT IRDFVSGQDK IDVSAISTLS
ALQFVNAFSG HAGEAILNYN QSSNLGSLAI DFTGQGAGDF LVGTVGQAFA TDIVV
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