Gene PSPTO_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3332 
Symbol 
ID1184990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3768937 
End bp3770364 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content58% 
IMG OID637394682 
Productalkaline metalloendoprotease 
Protein accessionNP_793115 
Protein GI28870496 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2931] RTX toxins and related Ca2+-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAG TCAAAGAAAA TGCTGCAATT CAACTCTCCG CCGCTACCAG CACCTCATTC 
GATCAGATCA ATACGTTTGC GCACGAGTAT GACCGTGGCG GTAACCTCAC GATCAACGGC
AAACCTTCGT ACTCGGTCGA TCAGGCTGCT AATTTCATTC TTCGCGATGA CGCCGCTTGG
GCGGATCGCG ACGGTAACGG CACCATCAAC CTCACGTATA CGTTCCTGAC CGCAAAACCT
GCCGGGTTCA ACAACGCCCT TGGGACTTTC AGTGCGTTCA ATGCGCAACA GAAAGCCCAA
GCGGTATTGT CGATGCAATC CTGGGCAGAC GTTGCCAAGG TCAGCTTTAC CCAAGCGGCT
TCCGGCGGCG ACGGGCATAT GACCTTTGGT AACTACAGTG ATGGCAGCAA TGGCGGGTCG
GCGTTTGCCT ACCTGCCGAG CGGCGGCCGT ACAGATGGTC AGTCCTGGTA CCTGATCAGC
GATTCTTACC GGCAAAACGT CTCCCCGGAC AACGGTAACT ATGGTCGTCA GACCCTGACC
CACGAAATCG GCCACACCCT GGGCCTGTCT CACCCTGGCG ACTACAACGC TGTTGACGGC
AACCCGACAT ACAAGGACGC AACCTACGCA GAAGACACGC GCGGCTACAG CGTCATGAGC
TACTGGAGTG AGTCCAATAC CGACCAGAAC TTCGTCAAGG GCGGCGCTTC GTCGTATTCC
TCGGCACCGT TGCTGGACGA TATTGCGGCT GTTCAGCAAC TCTACGGCGC GAACCTGAGC
ACGCGGGCCA CTGATACGGT CTACGGCTTC AACTCCACTG CCGGGCGCGA TTTCTACAGC
GCCACATCCG CCTCTTCCAA GGTGGTGTTT TCGGTGTGGG ATGGCGGGGG CAAGGATACC
CTCGACTTCT CCGGCTTCAC CCAGAACCAG AAAATCAACC TGAACGCGGC CTCGTTCTCT
GACGTCGGCG GCATGGTGGG TAACGTCTCC ATTGCCAAGG GCGTTGTGGT GGAAAACGCA
ATTGGGGGTT CGGGCAACGA TCTGTTGATC GGCAATGCTG CCGCCAACGA CCTCAAAGGC
GGTGCCGGCA ACGACATCAT CTACGGGGGT GGCGGCGCAG ACAGCCTCAC CGGCGGCGCA
GGCGCAGACA TTTTCGTGTT TGGCGCCAGT TCCGATTCCA ACCGTGCCGC TCAGGACACG
ATTCGCGATT TTGTCAGCGG TCAGGACAAG ATCGACGTAT CGGCTATCTC CACGCTGAGC
GCGTTGCAGT TCGTCAACGC CTTCAGCGGT CATGCTGGCG AAGCGATCCT GAACTACAAC
CAGAGCAGCA ACCTGGGTAG CCTGGCGATC GACTTCACCG GTCAGGGCGC TGGGGACTTT
CTGGTGGGAA CTGTTGGTCA AGCGTTTGCC ACTGATATCG TGGTTTAA
 
Protein sequence
MTKVKENAAI QLSAATSTSF DQINTFAHEY DRGGNLTING KPSYSVDQAA NFILRDDAAW 
ADRDGNGTIN LTYTFLTAKP AGFNNALGTF SAFNAQQKAQ AVLSMQSWAD VAKVSFTQAA
SGGDGHMTFG NYSDGSNGGS AFAYLPSGGR TDGQSWYLIS DSYRQNVSPD NGNYGRQTLT
HEIGHTLGLS HPGDYNAVDG NPTYKDATYA EDTRGYSVMS YWSESNTDQN FVKGGASSYS
SAPLLDDIAA VQQLYGANLS TRATDTVYGF NSTAGRDFYS ATSASSKVVF SVWDGGGKDT
LDFSGFTQNQ KINLNAASFS DVGGMVGNVS IAKGVVVENA IGGSGNDLLI GNAAANDLKG
GAGNDIIYGG GGADSLTGGA GADIFVFGAS SDSNRAAQDT IRDFVSGQDK IDVSAISTLS
ALQFVNAFSG HAGEAILNYN QSSNLGSLAI DFTGQGAGDF LVGTVGQAFA TDIVV