| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3327 |
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| Symbol | |
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| ID | 1184985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3762732 |
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| End bp | 3763907 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394677 |
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| Product | sarcosine oxidase |
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| Protein accession | NP_793110 |
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| Protein GI | 28870491 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01377] sarcosine oxidase, monomeric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0248673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAC ATTGCGAAGT GGCCGTGCTC GGTCTGGGTG CCATGGGTGC AGCCACTGTC
TATCAACTGG CGAAGGCCGG AGTCGATGTG ATTGGCGTCG ATCGCTACGC CCCTCCGCAC
ACCCAAGGCT CCAGCCACGG CGATACCCGC ATCACGCGCC TGTCGGTAGG CGAAGGCCCG
CAGTACCTGC CGCTGGTGCG CAGCTCGCAC CGCATCTGGC GCGAACTCGA GGCACTGAGC
GGCGAGTCGC TGTTCGAACA GTGCGGCGTG CTGGTGATGA CCTCCAGCCC GAGCTATGAC
GCAGCGGACG CTGACGACTT CACCCACAAG ACCATCGCGC TGGCACGCGC CTATGGCGTG
GAGCATCAGG TGCTGATGGC TACCGCCATT CGCGAGCGTT TTCCGCAGTT CGCACCGGTG
CTGGACACGG CCATTGGCTA CTTTGAACCC GAGGGCGGTT TTGTTCGGCC AGAACGCTGC
ATCGGCGTTC AGCTCAGGCT GGCAGCGCAA CACGGCGCAC GGCTGCTGAC CCACGAGACC
GTCACGCATT TACAGCCGTA CGGCGAACAG GTGCGCATTA CCACCGAAAA AGGCTCGATC
ATCGCCGACA AGGTCGTGGT CAGTGCCGGC ATGTGGTCGA CGGAGCTGCT GGGTGCACCT
TTCAGTGACC TGTTGAGGGT GTGCCGGCAA AAGCTGTTCT GGTTCGAACG ACAGCAAGAC
GCGGTATTTG CTCCGCGCTC GCCCAGCTTC ATCATGATTC ACGGGCCCGG TGATGCTGAC
GTGAGTTACG GCTTCCCGCC TCTGCCCGGC GAAAACAGCA TGAAGGTCGC CACCGAGCAA
TACATTGAGG ACTCAGCGCC GAACACGCTG GACCGCACCG TTACCGCGAG CGAGGAGCAG
GACAGGTTCG ACACCCAGAT AAAGGGCAAA ATTGCAGGCC TGAGCCCGCA CGTCGTCAAA
TCCTCGGTGT GCGCCTACAC CGTCACGCCC GACTACCACT TCATCATCGA TGAACACCCG
TACCTGAAAA ACGTGACCGT TGTATCGGCG TGCTCCGGTC ACGGCTTCAA GCATTCAGCC
GGGCTGGGGC TGGCCCTCGC GCAACGCTGT ATTCACGGCA AGAGCGATGT AGATCTTTCA
GCCTTCTCGC TCGCACGGTT CAGCGCCGCT GTTTAA
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| Protein sequence | MEQHCEVAVL GLGAMGAATV YQLAKAGVDV IGVDRYAPPH TQGSSHGDTR ITRLSVGEGP
QYLPLVRSSH RIWRELEALS GESLFEQCGV LVMTSSPSYD AADADDFTHK TIALARAYGV
EHQVLMATAI RERFPQFAPV LDTAIGYFEP EGGFVRPERC IGVQLRLAAQ HGARLLTHET
VTHLQPYGEQ VRITTEKGSI IADKVVVSAG MWSTELLGAP FSDLLRVCRQ KLFWFERQQD
AVFAPRSPSF IMIHGPGDAD VSYGFPPLPG ENSMKVATEQ YIEDSAPNTL DRTVTASEEQ
DRFDTQIKGK IAGLSPHVVK SSVCAYTVTP DYHFIIDEHP YLKNVTVVSA CSGHGFKHSA
GLGLALAQRC IHGKSDVDLS AFSLARFSAA V
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