Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3321 |
Symbol | bar |
ID | 1184979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3755364 |
End bp | 3755903 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637394671 |
Product | phosphinothricin N-acetyltransferase |
Protein accession | NP_793104 |
Protein GI | 28870485 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0173112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCGA CCCTAACCCT GCGAGATGCT CGCGACGATG ATATGCCTGC CGTCCAGGCG ATTTATGCAG ACCACGTTCT GCACGGCATT TCCAGTTTCG AGCTGGAACC GCCCACGCTC GCCGAACTGC TTGAGCGTCG TTCACAGGTA CTTGCCAAAG GTCTGCCGTA TCTGGTCGCC GAGCGCGCAA AGGAAGTGGT CGGCTATGGC TACGTCACTC CGTATCGGCC TCGTGCGGCC TATCGCTTTA CCGTGGAAGA TTCGGTGTAT GTACGCGACG GCATGGGCGG GCTGGGCATC GGTCAGGCAC TGCTGAGCGA GCTGATAAAA CGTTGCGAGA CAGGCGGCTG GCGGCAGATG ATCGCGGTGA TCGGCAACAG TGAAAACATC GCCTCGTTGC GTTTGCACGA ACGCTTGGGG TTTGGTCGGG TCGGCGTCTT TGAATCTGTA GGGTTCAAGC ACGGCCGCTG GGTAGACACG GTGCTCATGC AGCGAGCGCT GGGCGACGGC TCGGCCAGCG CGCCAGCCGA CCTGGCCTGA
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Protein sequence | MTPTLTLRDA RDDDMPAVQA IYADHVLHGI SSFELEPPTL AELLERRSQV LAKGLPYLVA ERAKEVVGYG YVTPYRPRAA YRFTVEDSVY VRDGMGGLGI GQALLSELIK RCETGGWRQM IAVIGNSENI ASLRLHERLG FGRVGVFESV GFKHGRWVDT VLMQRALGDG SASAPADLA
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