Gene PSPTO_3315 details

Gene Information

• Locus tag: PSPTO_3315
• Symbol: gspG
• ID: 1184973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 3747197
• End bp: 3747628
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637394665
• Product: general secretion pathway protein G
• Protein accession: NP_793098
• Protein GI: 28870479
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.82991
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTTTA GCCGTACACG CTTCAAACCC GCACGCCGAC AGGGCGGTTT CACGCTGTTG 
GAAATGCTCG CGGTTATCGT ATTGCTGGGC ATTGTCGCGA CCATCGTTGT GCGCCAGGTG 
GGCGGTAACG TTGACAAGGG CAAATACGGT GCAGGCAAGG CGCAACTCGC CAGCCTGGGC 
ATGAAGGTCG AAAGCTACGC GCTGGATGTC GGTTCGCCAC CCAAGACGCT GCAGCAGTTG 
ACCGAAAAGC CAGGTAATGC GTCGAACTGG AATGGCCCTT ATGCCAAGCC TTCGGACCTC 
AAAGACCCGT TCGGCCATGC GTTCGGTTAT CGCTTTCCGG GCCAGCATGG CAGCTTCGAC 
CTGATTTTCT ACGGCCAGGA CGGTCAGCCG GGTGGCGAAG GTTACAGCGC CGACCTGGGC 
AACTGGGAGT AA 

 

Protein sequence

MTFSRTRFKP ARRQGGFTLL EMLAVIVLLG IVATIVVRQV GGNVDKGKYG AGKAQLASLG 
MKVESYALDV GSPPKTLQQL TEKPGNASNW NGPYAKPSDL KDPFGHAFGY RFPGQHGSFD 
LIFYGQDGQP GGEGYSADLG NWE