Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3306 |
Symbol | |
ID | 1184964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3739697 |
End bp | 3740419 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394656 |
Product | phospholipase/carboxylesterase family protein |
Protein accession | NP_793089 |
Protein GI | 28870470 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.703144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAGT TTTTCGCTGC CTTGTTGTTT GCCGTCGCCA CAATGGCGCA GGCGCAGGAC AACACCTTGC ATACCGACCT GCCGCTGGAC TACCTGGCGC AGGCCAATGT CGAAACGCCA GACCGGCCGC TGGTGATTTT CATTCATGGC TATGGCAGTA ATGCGGCTGA TCTGTTCGGG CTCAAGGAAC ATTTGCCTGC GGGCTTCAAC TACCTGTCGG TGCAGGCTCC GGTGGAGTTG CAGGCAGACA GCTACAAGTG GTTTACCCAG AAGAAAGGCG GTACCGATTA CGATGGCGTG ACCGAAGACC TGAAAAGCAG CGGTAAGCGA CTGACCGATT TCATCACCCA GGCCACCGAG AAATTCCGCA CGCAGCCAGG CAAGGTGTTT CTGGTCGGGT TCAGCCAGGG CGCCATGATG AGCTACGAAG TCGCTTTGCG TCAGCCGACG CTGGTCGGTG GCTTTGCGGC GTTGAGCGGG CGGTTGTTGC CGGTGGTTAA ATCCGAAGTT AACGCGTCTG ATGACCTCAA GGCGCTGAAG GTTTTCATCG GTCACGGCGT GCAGGATCGC CAGGTGGCCT ACGCCAGCGG CCCGCAAGCC GAAGCAACCC TCAAGTCGCT CGGCCTGACG CCGCAGTTTC ATGGGTATGA AGGCCTGGGG CACAGCATCA ACGAGGCTGA AGTGGTGGAC CTGGCGAACT GGCTGCAGCA GTCAAGTCGG TAG
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Protein sequence | MLKFFAALLF AVATMAQAQD NTLHTDLPLD YLAQANVETP DRPLVIFIHG YGSNAADLFG LKEHLPAGFN YLSVQAPVEL QADSYKWFTQ KKGGTDYDGV TEDLKSSGKR LTDFITQATE KFRTQPGKVF LVGFSQGAMM SYEVALRQPT LVGGFAALSG RLLPVVKSEV NASDDLKALK VFIGHGVQDR QVAYASGPQA EATLKSLGLT PQFHGYEGLG HSINEAEVVD LANWLQQSSR
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