Gene PSPTO_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3306 
Symbol 
ID1184964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3739697 
End bp3740419 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID637394656 
Productphospholipase/carboxylesterase family protein 
Protein accessionNP_793089 
Protein GI28870470 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.703144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGT TTTTCGCTGC CTTGTTGTTT GCCGTCGCCA CAATGGCGCA GGCGCAGGAC 
AACACCTTGC ATACCGACCT GCCGCTGGAC TACCTGGCGC AGGCCAATGT CGAAACGCCA
GACCGGCCGC TGGTGATTTT CATTCATGGC TATGGCAGTA ATGCGGCTGA TCTGTTCGGG
CTCAAGGAAC ATTTGCCTGC GGGCTTCAAC TACCTGTCGG TGCAGGCTCC GGTGGAGTTG
CAGGCAGACA GCTACAAGTG GTTTACCCAG AAGAAAGGCG GTACCGATTA CGATGGCGTG
ACCGAAGACC TGAAAAGCAG CGGTAAGCGA CTGACCGATT TCATCACCCA GGCCACCGAG
AAATTCCGCA CGCAGCCAGG CAAGGTGTTT CTGGTCGGGT TCAGCCAGGG CGCCATGATG
AGCTACGAAG TCGCTTTGCG TCAGCCGACG CTGGTCGGTG GCTTTGCGGC GTTGAGCGGG
CGGTTGTTGC CGGTGGTTAA ATCCGAAGTT AACGCGTCTG ATGACCTCAA GGCGCTGAAG
GTTTTCATCG GTCACGGCGT GCAGGATCGC CAGGTGGCCT ACGCCAGCGG CCCGCAAGCC
GAAGCAACCC TCAAGTCGCT CGGCCTGACG CCGCAGTTTC ATGGGTATGA AGGCCTGGGG
CACAGCATCA ACGAGGCTGA AGTGGTGGAC CTGGCGAACT GGCTGCAGCA GTCAAGTCGG
TAG
 
Protein sequence
MLKFFAALLF AVATMAQAQD NTLHTDLPLD YLAQANVETP DRPLVIFIHG YGSNAADLFG 
LKEHLPAGFN YLSVQAPVEL QADSYKWFTQ KKGGTDYDGV TEDLKSSGKR LTDFITQATE
KFRTQPGKVF LVGFSQGAMM SYEVALRQPT LVGGFAALSG RLLPVVKSEV NASDDLKALK
VFIGHGVQDR QVAYASGPQA EATLKSLGLT PQFHGYEGLG HSINEAEVVD LANWLQQSSR