| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3304 |
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| Symbol | |
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| ID | 1184962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3737479 |
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| End bp | 3738675 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394654 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_793087 |
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| Protein GI | 28870468 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCACT CGGCCCAATC TGCGCATAAC ACCGTCACCA TGACGCCCGG TCTGGTGATG
CTGTTCGCGT TCTGCTGTGG CGCGATTGTC GCCAATATCT ATTACGCGCA ACCGATCATC
GAGCTGATTG CCCCAGACAT CGGGCTGTCG AGTACGGCGG CCAGTCTGAT TGTTTCGTTG
ACGCAGATCG GTTATGCACT GGGCCTGTTC TTTCTGGTGC CGCTGGGCGA TTTGCTGGAG
AACCGCAGGT TGATGCTGGT CACCACGGTG GTTGCGGTGC TCAGCCTGCT GGGCGCTGCA
TTTGCCGAGC AGCCGAATCT GTTTCTGCTG GTCTCGTTGC TGGTCGGTTT CAGCTCGGTG
TCGGTACAGA TGCTGATCCC GCTGGCGGCG CATCTGGCGC CGGAAGAATC GCGCGGCCGG
GTAGTTGGCA GCATCATGGG CGGGTTGCTG TTGGGGATTC TGCTCGCGCG GCCCATCGCC
AGTCTGGTGG CTGACCATTT CGGATGGCGT GCGGTGTTCG GTTCGGCGGC CGTGGTGATG
ATCGGTATCA GCGTGGTGCT GGCGACCACC ATGCCCAAAC GCCTGCCTGA ACACCGTGCG
TCCTATGGCC AGTTGCTGTT CTCGCTCTGG ACCCTGTTGC GGACCCAGCC TGTGCTGCGC
CAGCGTGCTT TTTATCAGGC CTGCATGTTT GCGACGTTCA GCCTGTTCTG GACCGCCGTA
CCGCTGGAAC TGTCGCGCAA TCACGGGCTA TCGCAAACCC AGATCGCCCT TTTTGCCTTG
ATCGGTGCCA TTGGTGCCAT CGCGGCCCCC ATCAGCGGCC GTTTGGCAGA CGCAGGCTAT
ACGCGGATAA CGTCATTGGG CGCACTGTTG TTCGGGGCAC TGAGCTTTCT TCCGGGCCTT
ATTCATCCGG TATACAGCGT GATCGGCCTG TCGATAACCG GCGTGGTGCT GGATTTCTGC
GTGCAGACCA GCATGGTGTT GGGCCAGCGC ACCGTTTATG CACTGGATGC CGCGAGCCGC
AGCCGACTCA ACGCGTTGTA CATGACCAGC ATTTTCATCG GCGGCGCGAT TGGCTCGGCG
GTGGCCAGCC CGCTGTTTGA TCATGGCGGC TGGACCTGGG TGTTGATCGC AGGCACGCTG
CTGCCGCTGA CTGCATTGCT GGCGTTGCTC AGGGATCGAT CCAGGCAGAA TGCGTAA
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| Protein sequence | MPHSAQSAHN TVTMTPGLVM LFAFCCGAIV ANIYYAQPII ELIAPDIGLS STAASLIVSL
TQIGYALGLF FLVPLGDLLE NRRLMLVTTV VAVLSLLGAA FAEQPNLFLL VSLLVGFSSV
SVQMLIPLAA HLAPEESRGR VVGSIMGGLL LGILLARPIA SLVADHFGWR AVFGSAAVVM
IGISVVLATT MPKRLPEHRA SYGQLLFSLW TLLRTQPVLR QRAFYQACMF ATFSLFWTAV
PLELSRNHGL SQTQIALFAL IGAIGAIAAP ISGRLADAGY TRITSLGALL FGALSFLPGL
IHPVYSVIGL SITGVVLDFC VQTSMVLGQR TVYALDAASR SRLNALYMTS IFIGGAIGSA
VASPLFDHGG WTWVLIAGTL LPLTALLALL RDRSRQNA
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