| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3302 |
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| Symbol | |
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| ID | 1184960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3734097 |
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| End bp | 3737132 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394652 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_793085 |
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| Protein GI | 28870466 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGGAGC GCTTCAATCT GTCGGCCTGG GGGCTTAAAC ACCGCACGCT GGTCTGGTAC
ATGATGTTCG TTTCACTGCT GATGGGCAGT TGGTCGTTTC TGAACCTGGG CCGCGAGGAA
GACCCCTCGT TCGCCATCAA GACCATGGTC ATCCAGGCCC GCTGGCCGGG CGCGACACTG
CCCGACACCC TGCAACAGGT CACAGACCGA CTGGAAAAGA AGCTTGAGGA AATCGACGCG
CTGGACTACG TGAAAAGTTA CACGCTGGCC AGTGAATCGA CGATTTTCGT GTTCCTCAAA
AGCGAAACCC GCAGCGCTGA TATCCCCGCG GCGTGGTATC AGGTGCGCAA AAAAATCAGC
GATGTGCGCA GCGAACTGCC CAGCGGTATT CAGGGCCCGG CGTTCAACGA CGAGTTTGGT
GACGTGTTCG GCAGCATCTA TGCGTTCACC GCCGACGGCC TGTCGTTTCG TCAGCTGCGC
GACTACGTCG AGCAAGTGCG CGCCGACATT CGCAGCGTGC CCAACCTGGG CAAGATCGAA
CTGCTCGGCG CGCAGCGCGA AGTCATTTAT CTGAATTTCT CCATTCGCAA GCTCGCGGCG
CTGGGCATCG ATCAGCGTCA GGTGTTGCAA AGCCTGCAAG CGCAAAATTC GGTGACGCCC
GCAGGCGTCA TGGAAGCCGG TCCTGAGCGT ATCGCCGTGC GGGCCAGCGG TCAGTTCAGC
AGTGAAGAAG ACCTTGAAGC CATCAACCTG CGCTTCGGCG ACCGATTCTT TCGCCTCAGC
GATCTGGCAA CCATCGAACG CCGTTATGCC GACCCGCCCT CCTCGCTGTT CCGCTTCAAC
GGCCAGCCCG CCATCGGCCT TGCCGTGGCC ATGAAACAGG GCGGCAACAT TCAGGCGTTC
GGCACGCAAC TACAGCAGCG CATCGACGAC CTGACCACCG AGCTGCCGCT GGGCATCGAC
GTGCACCTGG TGTCGAGCCA GGCCGAAGTG GTCGAAAAAG CCATCGGCGG TTTCACCCAC
GCCCTGTTCG AGGCGATCCT GATCGTTCTG GTGGTGAGTT TCATCAGCCT CGGGGTTCGC
GCAGGCCTGG TCGTTGCCTG CTCGATTCCG CTGGTACTCG CGCTGGTCTT CGTGTTCATG
GAGTACAGCG GCATCACCAT GCAACGCATT TCGCTCGGTG CGCTGATCAT CGCCCTCGGG
CTGTTAGTGG ATGACGCCAT GATCACCGTC GAAATGATGG TCACGCGCCT TGAAAGCGGC
GACTCCTTGC AGCAAGCCGC GACCTTTGCC TATACCTCGA CAGCCTTCCC GATGCTGACC
GGCACGCTGG TGACGGTTGC CGGTTTCGTG CCCATCGGCC TGAATTCCAG CTCAGCGGGC
GAATACGTGT TCACCATGTT CGCGGTCATC GCCGTGGCGC TGCTGCTGTC CTGGCTGGTG
GCGGTGCTGT TTGCGCCACT GATCGGCGTG CACATTCTCA AGGCGTCGGC ACAGCATGCT
GCGCCGGGGC GCTGGATGCG CGGTTTCAGC CGCCTGTTGA TCAAGACGCT GGAGCAGCGC
TGGTGGGTGA TCGGCATCAC GTTACTGATG TTCGTCGGCT CGCTGTTCGC GGGCAAGCTG
CTGCAGAATC AGTTCTTCCC GGACTCCGAC CGCCCGGAAA TCCTGGTGGA TATCTACATG
CCGCAAAACG GCTCCATCGA AGGCACACGC CAGACCATGG ACCGCTTTGA AGCAACGCTC
AAGGACGATC CCGACGTGCT GCGCTGGAGT TCGTATGTCG GCAAAGGCGC GGTGCGTTTC
TACCTGCCGC TGGACCAGCA ACTGAGCAAC CCTTTTTATG GGCAACTGGT GATCGTCAGC
CAGGGCGGCG CAGCGCGGGA TCGCCTGATC GAACGCCTGC GCCAGCGCTT TCGTGATGAC
TACGTTGGGG TGGGCGGCTA CGTTCAGCCG CTGAACATGG GCCCGCCCGT CGGCTGGCCG
GTGCAGTACC GGGTCAGCGG CCCGGACATC GAACAGGTGC GCAGTCAGGC CATGGCGCTG
GCCGCCATTC TCGACGCCAA CGCCAATATC GGTCAGGTCA TCTACGACTG GAACGAACCG
GGCAAGGTGT TGAAAATCGA CATCGCCCAG GACAAGGTGC GCCAGTTTGG CCTGTCGTCT
GAAGACGTGG CGCAGATCCT CAACAGCCTG GTCACCGGCA CGACCATCAC GCAGGTGCGC
GACAGTACTT ATCTGGTCGA TCTGGTAGGC CGCGCCGAAA GCGACGAACG CAGCTCGATA
CAGACCCTGA GCAACCTGCA AATCCCGACG CCCAATGGCT CGACGGTACC GCTGCTGGCA
TTCGCCACAC TCAGTTACGA ACAGGAACAG CCGCTGGTCT GGCGCCGCGA CCGGCTGCCG
ACCATCACCC TTAAAGCCAA CGTACTGGGC ACCTTGCAAC CGGCCGCACT GGTCAAGCAA
CTGAAGCCGG CGGTCGAGGC CTTCAGCGCC GGTTTACCTT TGCGCTATTC GGTCGCCACC
GGCGGCGCAG TCGAGGCCAG CGCTCGTTCG CAAGGGCCTA TATTAAAGGT CGTGCCGCTG
ATGTTGCTGT TGGTGGTGAG CTTCCTGATG ATTCAGCTGC ATAGCGTGAA AAAGCTCCTG
CTGGTCGTCA GCGTGGTGCC GCTGGGGCTG ATCGGCGTGG TCGCCGCGCT GTTGATGTCC
GGCTACCCGC TGGGCTTCGT GGCAATTCTC GGCGTGTTGG CGCTGATCGG TATCATCATT
CGCAACTCGG TGATCTTGGT GACGCAGATC GACGAGTTCA TCGCCGCCGG CGAAAGCGCC
TGGTCAGCCG TGGTCAAAGC CACCGAACAT CGCTGCCGAC CGATCCTGCT GACGGCAGCG
GCCGCCAGCC TGGGCATGAT CCCGATTGCC CGCGAGGTGT TCTGGGGGCC GATGGCCATC
GCCATGATCG GCGGCATCGC CATCGCTACC CTGCTGACGT TGTTTTTTCT GCCAGCGCTG
TATGTGGTGA GTTATGGGAT CAGGCGGCCC ACTTGA
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| Protein sequence | MRERFNLSAW GLKHRTLVWY MMFVSLLMGS WSFLNLGREE DPSFAIKTMV IQARWPGATL
PDTLQQVTDR LEKKLEEIDA LDYVKSYTLA SESTIFVFLK SETRSADIPA AWYQVRKKIS
DVRSELPSGI QGPAFNDEFG DVFGSIYAFT ADGLSFRQLR DYVEQVRADI RSVPNLGKIE
LLGAQREVIY LNFSIRKLAA LGIDQRQVLQ SLQAQNSVTP AGVMEAGPER IAVRASGQFS
SEEDLEAINL RFGDRFFRLS DLATIERRYA DPPSSLFRFN GQPAIGLAVA MKQGGNIQAF
GTQLQQRIDD LTTELPLGID VHLVSSQAEV VEKAIGGFTH ALFEAILIVL VVSFISLGVR
AGLVVACSIP LVLALVFVFM EYSGITMQRI SLGALIIALG LLVDDAMITV EMMVTRLESG
DSLQQAATFA YTSTAFPMLT GTLVTVAGFV PIGLNSSSAG EYVFTMFAVI AVALLLSWLV
AVLFAPLIGV HILKASAQHA APGRWMRGFS RLLIKTLEQR WWVIGITLLM FVGSLFAGKL
LQNQFFPDSD RPEILVDIYM PQNGSIEGTR QTMDRFEATL KDDPDVLRWS SYVGKGAVRF
YLPLDQQLSN PFYGQLVIVS QGGAARDRLI ERLRQRFRDD YVGVGGYVQP LNMGPPVGWP
VQYRVSGPDI EQVRSQAMAL AAILDANANI GQVIYDWNEP GKVLKIDIAQ DKVRQFGLSS
EDVAQILNSL VTGTTITQVR DSTYLVDLVG RAESDERSSI QTLSNLQIPT PNGSTVPLLA
FATLSYEQEQ PLVWRRDRLP TITLKANVLG TLQPAALVKQ LKPAVEAFSA GLPLRYSVAT
GGAVEASARS QGPILKVVPL MLLLVVSFLM IQLHSVKKLL LVVSVVPLGL IGVVAALLMS
GYPLGFVAIL GVLALIGIII RNSVILVTQI DEFIAAGESA WSAVVKATEH RCRPILLTAA
AASLGMIPIA REVFWGPMAI AMIGGIAIAT LLTLFFLPAL YVVSYGIRRP T
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