| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3301 |
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| Symbol | |
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| ID | 1184959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3733000 |
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| End bp | 3734100 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394651 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | NP_793084 |
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| Protein GI | 28870465 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.168698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCA CCGCCACAGG ACCACGATCG TCACATTTTC ACTGGCTACT CTGCGCGCTG
ATCGTGGCGC TACCGGGCTG TCGCGACAAA CCGCTGCGCG AAGTGATTGA TCGCCCGGTG
CTGTTCACCG AAATAGCCGA TCCACAAAAT GCGTCCTATG GTCGTTTTGC CGGAAGTATC
CAGCCGCAGC ATGAGGTTGC ACTGGGCTTT CGCATCGCCG GACGCCTGGC CACCCGGCAT
GCCGAGATGG GTGATCGGGT GCGCAAAGGC GACCTGCTGG CGACCCTCGA CCCCAGCGAC
CAGCAAAACC GCCTACGTGC CCGTCAGGCA GAACTGAGCA GAGCCCGGTC TGCCTGGCAG
CAGTTGAGCG ACGAGCAAAC GCGCTACCAG CAGCTATATA CCCGAGGCGT CGGCTCGCGG
GCGCGTCTGG ATCAGTTGAA CAGCGACCTG CGCAGCCAGA ACGCACTCCT CGATCAGGCC
AGCGCAGCGG TGCAACAAGC CGGTGACCAC CTTGCCTACA CCCGGCTTAC CGCCGAATTC
GACGGCCTGG TCACCCAGTG GCAAACCGAA GTGGGCCAGG TCATGGCCAC CGGGCAAGCG
GTGGTCAGCC TTGCCCGCCC GGAAAGCCGC GAAGCGGTGG TCGACCTGCC GGTCGGGCTG
CTGGCCTCGC TGGATGACAG TCGGCAGATC AGAGTGATTT CCCAGCTTGA TAAGCAGGTG
TCGGTGATTG CCAGTGTTCG CCAGTTGGCC CCGCAGATCG ATGCGGGCAC GCGCACCCAG
CGCGTCCGCC TGGCCTTGCA GCACATACCG GACAGCTTGC GTCTGGGCTC CACAGTGACC
GTTGAAATAA GCGGCAACGC CCCGGCCTTT CATGAGCTGC CGGCCAGCGC CGTGCTGGCG
CGGGATGGCA AGGATCAGGT GTGGGTGATC GACCCTTCAA CCTCGACACT GAGCCCGCGC
GCGGTGCAGG TGCTGGCGCG TAAGGGCGGC AAAGTACAGG TCAGCGGCGA ACTGCACGAA
GGCGAGAAAG TGGTGACTGC CGGCGTCAAC GGCATGCAGT CCGGACAGAA AATACGCATG
CAACGCGAGG TCAGTTTGTG A
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| Protein sequence | MNGTATGPRS SHFHWLLCAL IVALPGCRDK PLREVIDRPV LFTEIADPQN ASYGRFAGSI
QPQHEVALGF RIAGRLATRH AEMGDRVRKG DLLATLDPSD QQNRLRARQA ELSRARSAWQ
QLSDEQTRYQ QLYTRGVGSR ARLDQLNSDL RSQNALLDQA SAAVQQAGDH LAYTRLTAEF
DGLVTQWQTE VGQVMATGQA VVSLARPESR EAVVDLPVGL LASLDDSRQI RVISQLDKQV
SVIASVRQLA PQIDAGTRTQ RVRLALQHIP DSLRLGSTVT VEISGNAPAF HELPASAVLA
RDGKDQVWVI DPSTSTLSPR AVQVLARKGG KVQVSGELHE GEKVVTAGVN GMQSGQKIRM
QREVSL
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