| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3287 |
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| Symbol | |
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| ID | 1184945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3715029 |
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| End bp | 3715985 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394637 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
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| Protein accession | NP_793070 |
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| Protein GI | 28870451 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTAT TGAAAATCGC AGTGCTCGAT GACTGGCAGA ACGTCGCCAG TGGCGTGGTC
GACTGGTCTG CCCTCGACTC GGTAGGTGAA ATCAGCTTTC TGCACGACTA CCCGGCCGAC
ACCGCGACCA TGGTCCAGCG CCTGCAAGGC TTCGACGTCC TCTGCGTGAT GCGCGAGCGA
ACATTGTTCG ATGACGCGCT GCTCAGCCAG TTGCCAAACC TGCGTTTGCT GGTGACAGGC
GGCATGCGCA ACGCGGCCAT CGATACAGCG GCTGCCGAGC GTCAGGGCAT TGTTGTATGT
GGCACTGAAA GCTACAAAAA CGCAGCGCCG GAACTGACCT GGGCGCTGAT CATGGGCATC
ACCCGCAACC TGGTGGCCGA GGCCAACTCA CTGCGCGCAG GCAACTGGCA GGTCGGGCTG
GGCAGCGACC TGCATGGCAA GACCCTGGGC ATTCTCGGCC TGGGCAGCAT CGGCAAATGG
ATCGCCCGTT ACGGGCAGGC GTTCGGCATG AACGTCATCG CCTGGAGCCA GAACCTGACT
GCCGAAGCTG CCGCCGAATC GGGCGTCACC TACGTCAGCA AACAGCAACT GTTCGAGCAA
GCCGATGTGC TGTCGGTCCA CCTGGTGCTC AGCGACCGCA GCCGAGGGCT GGTCGATGCA
CAAGCGCTGG GCTGGATGAA ACCAAGCGCC TACCTGATCA ACTCGTCCCG CGGCCCGATC
ATCGATCAGG CTGCGCTCAT CAAGGTCCTG CAACAGCGCC ACATCGCTGG CGCCGCGCTG
GACGTGTTCG ACATCGAACC GCTGCCCGCT GATCACCCGT TCCGCACGTT GGACAACGTT
TTGGCAACGC CACATATCGG CTATGTCACC GAGAACAACT ATCGGACTTT TTACGGGCAG
ATGATTGAAG CTATTCAGGC CTGGCATGCG GGGTCGCCGA TTCGGGTGTT TGGCTGA
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| Protein sequence | MTLLKIAVLD DWQNVASGVV DWSALDSVGE ISFLHDYPAD TATMVQRLQG FDVLCVMRER
TLFDDALLSQ LPNLRLLVTG GMRNAAIDTA AAERQGIVVC GTESYKNAAP ELTWALIMGI
TRNLVAEANS LRAGNWQVGL GSDLHGKTLG ILGLGSIGKW IARYGQAFGM NVIAWSQNLT
AEAAAESGVT YVSKQQLFEQ ADVLSVHLVL SDRSRGLVDA QALGWMKPSA YLINSSRGPI
IDQAALIKVL QQRHIAGAAL DVFDIEPLPA DHPFRTLDNV LATPHIGYVT ENNYRTFYGQ
MIEAIQAWHA GSPIRVFG
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