Gene PSPTO_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3259 
Symbol 
ID1184917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3683180 
End bp3685186 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content61% 
IMG OID637394609 
Productpeptidase, U32 family 
Protein accessionNP_793042 
Protein GI28870423 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTAC CCAAGCACCA CCTGGAATTG CTCAGCCCTG CCCGGGATGT GACCATCGCC 
CGCGAAGCCA TCCTGCATGG CGCCGACGCG GTATACATCG GCGGGCCGAG CTTTGGTGCG
CGACACAACG CCTGCAACGA GGTCAGCGAT ATCGCCGAAC TGGTGAAATT TGCCCATCGC
TACCACGCGC GAATCTTCAC CACGATCAAC ACCATCCTGC ATGACGACGA GCTGGAACCG
GCGCGCAAGC TGATCCATCA GCTCTACGAT GCAGGTGTCG ATGCGCTGAT CGTCCAAGAC
CTCGGGGTCA TGGAGCTGGA CATTCCGCCC ATCGAGTTGC ACGCCAGCAC GCAGACCGAT
ATTCGCACCC TGGGCCGGGC GAAGTTTCTT GATCAGGCCG GTTTCTCGCA ACTGGTGCTG
GCCCGCGAGC TGAACCTGCA GGAAATTCGT GACATCGCCC GTGAAACCGA CGCGGCCATC
GAGTTCTTCA TCCACGGCGC ACTGTGTGTG GCGTTCTCCG GGCAGTGCAA CATTTCCCAT
GCGCAAAATG GCCGCAGCGC CAACCGTGGC GACTGCTCGC AAGCCTGCCG CCTGCCGTAC
ACGCTCAAGG ATGATCAGGG CCGCGTCGTC GCTTTCGAAA AACACCTGCT GTCGATGAAA
GACAACAACC AGAGCGCCAA CCTGGGCGAT CTGGTGGACG CTGGCGTGCG CTCGTTCAAG
ATCGAAGGTC GCTATAAAGA CGCAGGCTAC GTCAAAAACA TTACCGCCTA TTACCGTCAG
CGTCTGGACG AGATTCTTGA AGACCGCCCG GACCTGGCGC GCGCCTCCAG CGGCCGCACC
GCGCATTTTT TCGTGCCCGA CCCGGAGAAG ACCTTTCACC GTGGCAGCAC CGATTACTTT
GTCAGCGACC GCAAGATCGA CATCGGCGCA TTCGATACGC CGACGTTTAC CGGCTTGGCA
GTCGGCACCG TCGAGAAACT TGGCAAGCGT GACCTGATCG CTGTCACCCA TGAGCCGCTG
TCCAATGGCG ACGGCCTCAA TGTGCAGATC AAGCGTGAAG TGGTGGGCTT CCGGGCCAAT
ATCTGCGAGC TCAAAGGCGA GTTTGAAGAA GAAGGCGAGA AGCGCTGGCG CTACCGAGTA
GAGCCCAACG AGATGCCGGC GGCCCTCTCC CGCCTGCGCC CCAACCATCC GCTGAACCGT
AACCTGGATC ACAACTGGCA GCAGGCGTTG CTCAAGACTT CCGCCGAGCG CCGCATCGGC
ATTCAGTGGC AGGTTGCGTT GCGTGAAGAT CACTTGAGCC TTAACGCGAC CAGTGAAGAA
GGCGTGAGCG TGATGGTCGG CCTGGACGGC CCGTTCGGTG CAGCCAACAA GCCCGAGCAG
GCGCTGGATC AGTTGCGTGA TCTGCTCATC CAGCTAGGCA CCACGATCTA CCATGCTCAG
GACGTGGAAC TGGATGCGCC TCAAGCGTTT TTCGTGCCCA ATTCGCAACT CAAGGCACTG
CGCCGCGATG CCATCGAGGC GCTGACCGAG GCGCGCATAC AGGCTCACCC GCGCGGTGGA
CGCAAGGCAG AAACCACCCC GCCACCGGTT TACCCTGATT CGCACCTGTC GTTTCTGGCC
AACGTTTACA ACCAGAAAGC TCGCGATTTC TACCACCGCC ACGGCGTGCA GTTGATCGAT
GCGGCTTACG AAGCGCATGA GGAAACCGGC GAGGTGCCGG TGATGATCAC CAAGCATTGT
CTGCGCTTCT CGTTCAACCT GTGCCCGAAA CAGGCAAAAG GCGTGACCGG CGTGCGCACC
AAGGTCGCGC CCATGCAGTT GGTGCAGGGT GACGAAGTGC TGACCCTGAA GTTCGACTGC
AAGCCGTGTG AAATGCACGT GATCGGCAAG ATGAAGGGCC ACATCCTCGA CCTGCCATTG
CCCGGCAGCG CTGCGGCCAA ATCGGTGGTC GGCCACATCA CCCCGGAAGA CCTGCTCAAG
ACTGCCCGCC AGCGTCATCC GCGCTGA
 
Protein sequence
MSLPKHHLEL LSPARDVTIA REAILHGADA VYIGGPSFGA RHNACNEVSD IAELVKFAHR 
YHARIFTTIN TILHDDELEP ARKLIHQLYD AGVDALIVQD LGVMELDIPP IELHASTQTD
IRTLGRAKFL DQAGFSQLVL ARELNLQEIR DIARETDAAI EFFIHGALCV AFSGQCNISH
AQNGRSANRG DCSQACRLPY TLKDDQGRVV AFEKHLLSMK DNNQSANLGD LVDAGVRSFK
IEGRYKDAGY VKNITAYYRQ RLDEILEDRP DLARASSGRT AHFFVPDPEK TFHRGSTDYF
VSDRKIDIGA FDTPTFTGLA VGTVEKLGKR DLIAVTHEPL SNGDGLNVQI KREVVGFRAN
ICELKGEFEE EGEKRWRYRV EPNEMPAALS RLRPNHPLNR NLDHNWQQAL LKTSAERRIG
IQWQVALRED HLSLNATSEE GVSVMVGLDG PFGAANKPEQ ALDQLRDLLI QLGTTIYHAQ
DVELDAPQAF FVPNSQLKAL RRDAIEALTE ARIQAHPRGG RKAETTPPPV YPDSHLSFLA
NVYNQKARDF YHRHGVQLID AAYEAHEETG EVPVMITKHC LRFSFNLCPK QAKGVTGVRT
KVAPMQLVQG DEVLTLKFDC KPCEMHVIGK MKGHILDLPL PGSAAAKSVV GHITPEDLLK
TARQRHPR