Gene PSPTO_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3258 
Symbol 
ID1184916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3682282 
End bp3683073 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637394608 
Productiron ABC transporter, ATP-binding protein 
Protein accessionNP_793041 
Protein GI28870422 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.047532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGT TTGCGCAGTC GCCCCGCTCT TGCGTGCTCG GTTGCTCCGG GCTCGGCTAT 
TCGGTGCGTG GCACGCCCCT GCTGAGCGAT GTCGATCTGA GCATTGCCAC AGGCGAGACA
CTCGCGGTGG TCGGCCCTAA TGGTTCGGGC AAATCCACCC TGCTCAAGCT GCTGGCTGGC
ATTCAGAAGC CGGGCAGCGG CGCGGTCAGG CTGGGTGAGC AGGCACTCGC CGCGATGAGC
CGCAGAGACG TGGCACGCCT GTTGGCGGTG GTCGAGCAGC AGGCCGAAAC CAGCGACGCG
GTGACCGTGC TCGACGCCGT CGAACTGGGC CGCACGCCCT GGCTGTCGGC ACTGGAGCCG
TGGAGCGCGA ATGACGACGC CATCGTGCGT CAGGCCTTGC AGGATGTGGA CATGCTGCAC
ATGCAAAAAC GGGCCTGGCA CACCCTGTCC GGGGGCGAGC GGCAACGTGT GCACATCGCC
CGAGCGCTGG CACAACGGCC GCAAATTCTG CTGCTGGATG AGCCGACCAA TCATCTGGAC
ATCCAGCATC AGCTCACTAT TCTCGGCCTG GTCAGGGCTT TGCCGGTGAC CACGGTGATT
GCCCTGCATG ACCTGAATCA GGCACTGGAC TGCGACCGTG TCGCCGTTAT GGAAAAAGGC
CGACTGGTGG CGCTGGGCAC GCCGGTCGAG GTACTGACGC CCAAGCGCCT ACTGAGCACC
TTCGGCGTCG TGGCGCACTG GCTGACCGAC CCCTTCGATG GCGCGAAAAT CCTGCGCTTG
CGCTCGCGCT GA
 
Protein sequence
MNEFAQSPRS CVLGCSGLGY SVRGTPLLSD VDLSIATGET LAVVGPNGSG KSTLLKLLAG 
IQKPGSGAVR LGEQALAAMS RRDVARLLAV VEQQAETSDA VTVLDAVELG RTPWLSALEP
WSANDDAIVR QALQDVDMLH MQKRAWHTLS GGERQRVHIA RALAQRPQIL LLDEPTNHLD
IQHQLTILGL VRALPVTTVI ALHDLNQALD CDRVAVMEKG RLVALGTPVE VLTPKRLLST
FGVVAHWLTD PFDGAKILRL RSR