Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3256 |
Symbol | |
ID | 1184914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3680085 |
End bp | 3681266 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394606 |
Product | iron ABC transporter, periplasmic iron-binding protein, putative |
Protein accession | NP_793039 |
Protein GI | 28870420 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0273216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTCA GGAGACCTGC CGACCCGATT CAACCAACTA ACCGGCGGGG TGTCCGGGAA GGACATCCGC ACGCGTCGGC ACCTTTTGCC GTGCCCGGTC ATCTGCCGGG GATGTGTTTC CTGATGTGCA TTGCGCCTTG GCACCTGCTC CAATGGAGAC CGCATTTCAT GTCGCTGCCC CGCCTCGCCG CAATCGCCGC CTGCCTGACG TTGTCTACCC TGACGTTCGC CGCCCCCACG CAGTATCCGC TGACCGTGGA AAACTGCGGT TCGACCCTGA CGTTCGCGCA TGCACCGACC AAAGCCGTGA CCATTGGCCA GGCGGGCACT GAAATGCTCT ATGAACTGGG GTTGGGCGAC AAGCTGGTCG GCACCTCGCT GTGGTTCAAC AACGTGCTGC CGCGCTTCAA GGCACAGAAC GACAAGGTGG AGCGCCTGGC CGATAACGAA CCGGGTTTTG AGGCGGTGAT CGGCAAACGT CCCGAACTGG TGGTCGTGCA GCTGGAATGG ATGGTCGGCA AACAGGGCGC AGTCGGTACC CGCGAGCAGT TTCATGATCT GAAAATCCCC ACGTACATTC TGCCGTCCGA TTGCGAAGGC AAAGACAACC TGGTCGGCGC CGATGGTACC CGCCTGGAGC CTTTTCGCAT CGAGACCATC TACAAGAGCA TCGAACAACT GGCGCAGGTT TTCGATGTGC AGGATCGCGG CGACGCATTG GTCGCGCAGC TGAAAACGCG CCTGAGCGCA GCGATTGCCA ACGTCAGGCA GAACAAGGCT AACGATGTGT CTGCGCTGTT CTGGTTTTCC AGCTCCGAGA TAGCCAGCGA TCCTTTTGTA GCAGGCCGCA AAGGCATCCC GGACTTCATG CTCAACAGCC TGGGCATGCG CAACATCGTC CAGTCCGACG AAGAATGGCC AACCGTGGGC TGGGAAACCA TTGCCAAGGC CAACCCGAGC ATTCTGGTGA TTGCACGCAT GGACCGTCGC CGCTTTCCGG CCGACGACTA CCTGAAGAAG ATCGCCTTCC TCAAGAGCGA CCCGGTGACG CGCAACATGG ACGCGGTCAA GCATGACCGG ATCGTGATCA TCGACGCCGA GGGCATGCAG GCAGGTCTGC GCCTGTTCAC CGGGTTCGAA GAACTGGCCG ACGCCGCCAA CCGTTTCAAC GCCGCACGAT GA
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Protein sequence | MPVRRPADPI QPTNRRGVRE GHPHASAPFA VPGHLPGMCF LMCIAPWHLL QWRPHFMSLP RLAAIAACLT LSTLTFAAPT QYPLTVENCG STLTFAHAPT KAVTIGQAGT EMLYELGLGD KLVGTSLWFN NVLPRFKAQN DKVERLADNE PGFEAVIGKR PELVVVQLEW MVGKQGAVGT REQFHDLKIP TYILPSDCEG KDNLVGADGT RLEPFRIETI YKSIEQLAQV FDVQDRGDAL VAQLKTRLSA AIANVRQNKA NDVSALFWFS SSEIASDPFV AGRKGIPDFM LNSLGMRNIV QSDEEWPTVG WETIAKANPS ILVIARMDRR RFPADDYLKK IAFLKSDPVT RNMDAVKHDR IVIIDAEGMQ AGLRLFTGFE ELADAANRFN AAR
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