| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3247 |
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| Symbol | |
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| ID | 1184905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3670593 |
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| End bp | 3671759 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394598 |
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| Product | mandelate racemase/muconate lactonizing enzyme family protein |
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| Protein accession | NP_793031 |
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| Protein GI | 28870412 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.123279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCA CCATGAACAT TACCTCGGTC AGTGTCGACG TCTTTTCCTT CCCTTCGCGC
CGCGCTGTAG ACAGCGCGGG CCACGCTCAT CCCGGCGAAG AAAAACCGGT CAGAATGGCC
ATGCTGCGCA TCGCTTGTGA CGATGGCAGC GAGGGGTTTT CCTTCGGTCC GCCGGAATTG
ATTCGCCCGC ACATCATCGA GTCGTTCGTC AAGAAAGTGC TGATCGGCCA GAACCCGATT
AACCGCGAGA AAATCTGGCA GGAACTGGCC CACTGGCAAC GTGGCAGCGC CAGTCAGTTC
ACCGACCGTG CGTTGGCACT GGTGGAGCAG GCATTGTGGG ATCTGGCCGG ACGCGCCTTG
AAACTGCCCG TGCACAAACT GCTGGGCGGC TATCGCGACA AGGTGCTGGC CTACGGCTCG
ACCATGTGCG GCGACGACCT GCCCGGCGGG CTTTCCACGC CGGATGAGTA TGGGCAATTT
GCCGAAAAGC TGGTTCAGCG CGGCTACAAG GGCATCAAGC TGCACACCTG GATGCCACCG
ATTTCGTTTG CGCCAAACCC GCGCATGGAT GTCCAGGCCT GCGCCGCTGT GCGCGAAGCA
GTTGGGCCGG ACATCGCCCT GATGCTCGAC GGCTACCACT GGTACAGCCG CACCGACGCG
CTGTTTATCG GTCGCCAATT GCAAAAGCTC GACTTCGCCT GGTTCGAAGA ACCGATGATG
GAAGACTCCG CCGAATCCTA TGCCTGGCTG GCGGCCAATC TGGATATTCC TGTGCTCGGC
CCGGAGAGCA TTGCCGGCAA GTATCACAGC CGCGCCAGTT GGGTAACCAA CAAGGCCTGC
GACATTCTGC GTGCCGGCGT GGCGGGCGTC GGCGGCATCG GGCCATGTTT AAAGGTCGCG
CATCTGGCCG AGTCGTTCGG CATGGACTGT GAAGTCCACG GCAACGGCGC TGCCAACCTG
GCCGTAGTAG GCGCAATCAG CAACTGCCGC TGGTACGAGC GCGGCCTGCT GCACCCGTTT
CTTGATTACG ACGACGTGCC CGCTTACCTC AACACCCTCG TCGACCCGAT GGACAGCGAC
GGTTTTGTGC ACCTCTGCGA AAAGCCGGGG CTGGGCGAAG ACATCAACTT CAGCTATATC
GAGACCCACA CCGAACAACG CTACTGA
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| Protein sequence | MKVTMNITSV SVDVFSFPSR RAVDSAGHAH PGEEKPVRMA MLRIACDDGS EGFSFGPPEL
IRPHIIESFV KKVLIGQNPI NREKIWQELA HWQRGSASQF TDRALALVEQ ALWDLAGRAL
KLPVHKLLGG YRDKVLAYGS TMCGDDLPGG LSTPDEYGQF AEKLVQRGYK GIKLHTWMPP
ISFAPNPRMD VQACAAVREA VGPDIALMLD GYHWYSRTDA LFIGRQLQKL DFAWFEEPMM
EDSAESYAWL AANLDIPVLG PESIAGKYHS RASWVTNKAC DILRAGVAGV GGIGPCLKVA
HLAESFGMDC EVHGNGAANL AVVGAISNCR WYERGLLHPF LDYDDVPAYL NTLVDPMDSD
GFVHLCEKPG LGEDINFSYI ETHTEQRY
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