Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3246 |
Symbol | |
ID | 1184904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3669338 |
End bp | 3670036 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394597 |
Product | hypothetical protein |
Protein accession | NP_793030 |
Protein GI | 28870411 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2062] Phosphohistidine phosphatase SixA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.139433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTGACA CGCTAATCGA CAACAAGAAT GTCCTGCCCG ATTCAGGTAT CCGCCAGCGC TACAAATTGC AGCGGCACAT CGTATCGATC TCGGTCACAG TCGTATTGAT GGCCATCTGC GCGTGGTTTT ACATGGCTTT TTCCAGCGTG CATGTGATGG ACCTTGGAAT GGGCAGCAAC CTGAAAGTAT CCGGCCTGCG CGAGCAATGG CTGCGCGGCG ACGTAGTGGT CATGATTCGT CACGCCGAAC GCTGCGACCG CTCGACAAAT CCCTGCATGG CCGACGCTGA CGGCATCACC TCCAACGGCC GGGAGGCGGC GCTGGCGGTG GGCGCAGGCC TGCAGAAGAT GGGCATGCAG CACGTTCAAA TGATCGCCAG CCCGAAAACC CGCACGCAAC AGACGGCGCA ATTGCTGGCA GGGCATGCGG TAACCGGGCA GGAATGGATC AACGACTGCG ATGGCGACTT CATGAAGGTC GTCCAGGCGC ACAAGGTCAG CGGTGAAAAC CTGGTGCTGG TGACGCACAG CGGTTGCATC GACCAGTTCG AACGCAAGCT CGGCGTACCG GGTGGCGAGC GCTCCAGTGA ATATGCCCAG GCATTTTTCG TGCAGATGGA CGGCAGTCAT CGGCCGAAGG TTCTAGGCTC CCTGAACGCC GGACAATGGG TCAACCTCAG CCGCGAGCAA TTCAATTGA
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Protein sequence | MADTLIDNKN VLPDSGIRQR YKLQRHIVSI SVTVVLMAIC AWFYMAFSSV HVMDLGMGSN LKVSGLREQW LRGDVVVMIR HAERCDRSTN PCMADADGIT SNGREAALAV GAGLQKMGMQ HVQMIASPKT RTQQTAQLLA GHAVTGQEWI NDCDGDFMKV VQAHKVSGEN LVLVTHSGCI DQFERKLGVP GGERSSEYAQ AFFVQMDGSH RPKVLGSLNA GQWVNLSREQ FN
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