Gene PSPTO_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3246 
Symbol 
ID1184904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3669338 
End bp3670036 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID637394597 
Producthypothetical protein 
Protein accessionNP_793030 
Protein GI28870411 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.139433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTGACA CGCTAATCGA CAACAAGAAT GTCCTGCCCG ATTCAGGTAT CCGCCAGCGC 
TACAAATTGC AGCGGCACAT CGTATCGATC TCGGTCACAG TCGTATTGAT GGCCATCTGC
GCGTGGTTTT ACATGGCTTT TTCCAGCGTG CATGTGATGG ACCTTGGAAT GGGCAGCAAC
CTGAAAGTAT CCGGCCTGCG CGAGCAATGG CTGCGCGGCG ACGTAGTGGT CATGATTCGT
CACGCCGAAC GCTGCGACCG CTCGACAAAT CCCTGCATGG CCGACGCTGA CGGCATCACC
TCCAACGGCC GGGAGGCGGC GCTGGCGGTG GGCGCAGGCC TGCAGAAGAT GGGCATGCAG
CACGTTCAAA TGATCGCCAG CCCGAAAACC CGCACGCAAC AGACGGCGCA ATTGCTGGCA
GGGCATGCGG TAACCGGGCA GGAATGGATC AACGACTGCG ATGGCGACTT CATGAAGGTC
GTCCAGGCGC ACAAGGTCAG CGGTGAAAAC CTGGTGCTGG TGACGCACAG CGGTTGCATC
GACCAGTTCG AACGCAAGCT CGGCGTACCG GGTGGCGAGC GCTCCAGTGA ATATGCCCAG
GCATTTTTCG TGCAGATGGA CGGCAGTCAT CGGCCGAAGG TTCTAGGCTC CCTGAACGCC
GGACAATGGG TCAACCTCAG CCGCGAGCAA TTCAATTGA
 
Protein sequence
MADTLIDNKN VLPDSGIRQR YKLQRHIVSI SVTVVLMAIC AWFYMAFSSV HVMDLGMGSN 
LKVSGLREQW LRGDVVVMIR HAERCDRSTN PCMADADGIT SNGREAALAV GAGLQKMGMQ
HVQMIASPKT RTQQTAQLLA GHAVTGQEWI NDCDGDFMKV VQAHKVSGEN LVLVTHSGCI
DQFERKLGVP GGERSSEYAQ AFFVQMDGSH RPKVLGSLNA GQWVNLSREQ FN