| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3240 |
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| Symbol | tolQ-1 |
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| ID | 1184898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3660863 |
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| End bp | 3661573 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394591 |
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| Product | tolQ protein |
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| Protein accession | NP_793024 |
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| Protein GI | 28870405 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.126744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACGCCA CACTCGAACA CATGACCGTC TGGGGCCTGA TCAGCGACGC CAGCCTGCTG
GTCAAGGCCG TTATGCTGAT TCTGCTGCTC GCGTCATTGG TCAGCTGGTT CCTGATCGTT
CAGCGCAGCC TGGCCCTGCG TCATTACGAG CGTTCGCTGG ATGCCTTCCA GCAGCGTTTT
CGCAGCGAAG CCGAGCTGGC GCCGCTGTAC GCGCAGGCGT CTTCAGCCCA AAGCGATTCT
GGCGGCATCG GCTCGATCTT TCAGGCCGGC TACGCCGAGT ACATGCAGCT CAAACATCGC
CCCGGTATCG ATCCCGATGT TGTGCTGTCA GGCGTCGAAC GCTCGTTGCA GGTGGCGATC
AGCGAGCAGG AATTGCAGCT GGAAAAGGGC CTGCAGTTTC TCGCCACTGT GGGCTCCGTC
AGCCCGTACA TCGGCCTGTT CGGCACGGTG TGGGGGATCA TGAATTCGTT CATCGGCCTG
TCGCAGGTGC AACAGGCGAC GCTGTCCACG GTCGCACCGG GTATCGCCGA AGCGTTGATT
GCAACCGCCA TCGGCCTGTT CGCCGCCATT CCGGCGGTCA TTGCCTATAA CCGTTTTGCC
GCACGCGGCC AGACCCTGAC GGCGCGTTAC TACACCTTTG GCAACGAACT GCAGGTGCGC
CTCAACCGCA CGCTGCAAGG TCTGCCACGC AACATGGCCG CTGCGGCCTG A
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| Protein sequence | MHATLEHMTV WGLISDASLL VKAVMLILLL ASLVSWFLIV QRSLALRHYE RSLDAFQQRF
RSEAELAPLY AQASSAQSDS GGIGSIFQAG YAEYMQLKHR PGIDPDVVLS GVERSLQVAI
SEQELQLEKG LQFLATVGSV SPYIGLFGTV WGIMNSFIGL SQVQQATLST VAPGIAEALI
ATAIGLFAAI PAVIAYNRFA ARGQTLTARY YTFGNELQVR LNRTLQGLPR NMAAAA
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