| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3233 |
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| Symbol | |
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| ID | 1184890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3652016 |
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| End bp | 3653257 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394584 |
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| Product | peptidase, M20/M25/M40 family |
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| Protein accession | NP_793018 |
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| Protein GI | 28870399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCAT TTTCCCGCAC GCCGCTTGCT GCTCATCTGG GCCTCGCTTT TGTGCTGACG
GCGTTGACGC CGATGGTCAT GGCCGATCCG CACAAGGTGA TTCAGGCCGA TGCCGAGCAA
TACCAGGGCG AGGCCTTGAA ACTGCTGGAG CGTCTGGTCA ACATCGATTC GGGTTCCGGT
TACGTGCCGG GCCTGACCCA GGTCAGCGAC ATTGCGATTG AAGAGCTTAA AAAACTCGGT
GCCACCATCG AGCTTGTGCC GAACACACCG GAGGCCAGCA ATCATGTCCT TGCCACCCTG
AAAGGCACCG GCAAGGCGAA GATTCTGTTG ATGGCGCACA TGGACACCGT GTTCAAGGAA
GGCTCGGCGG CCGAGCGGCC GTTTCACATC AAGGACGGTC GTGCCTACGG CCCCGGCGTG
ATGGACGACA AGGGCGGTAT TGTTGCCGCT ATCTATGCAC TGAAGGTCCT GCACAACCTG
AAATTCACCG ACTACGCGCA GATCACCGTA TTGCTCGACG CCAGCGAGGA AACCGGCTCT
GTGGTCGCCA CTGAACTGAT CAAGAAAACC GCCAGGGAAC ACGATGTCAC GCTGAACCTG
GAACCGGGTC GCCCGGCCGA TGGGCTGGTG GTGTGGCGCA AGGGTTCTGC CACTGCGCTG
GTTGAAGTCA AGGGCAAGGC TTCGCATGCA GGCGTTGCGC CGGAACTGGG TCGCAATGCC
GCCACCGAAG TGGCGCATCA GATTCTCCAG CTCGGCAAGC TGGGCGATGA GGAAAAGAAA
ACCACCATCA ACTTCACTGT GCTCAAGGCG GGTGATCGCA CCAACGTGAT CCCGGATCAA
GCCAGCGCCA AGGCGGATGT GCGCGCGGCA GTACCGGAGG AGTTCGACCG GATCGAAAAA
GACCTCGCCA AGGTCTCGGC CAACAAGCTG GTGCCCGACA CCGAGGTCAA GACCAGTCTG
GTCCGTGGCC TGCCGCCGAT GCCGCAAACT GCGCAGTCCG ATGCGCTGGT CGCCATGGCT
CAGGGCATTT ACGGCGAACT GGGGCGCACG CTGACCATCG AAGGCAGCGG CGGGGCGGCT
GATTCAAGCC TGTCTGCCAG CGTGGGCACG CCGACGCTGG ATGGCTTCGG GATTGTCGGC
GGCAACATTC ATACGCCCGA GGAATATGCC GAGGTCGGCA GTGTGGCGCC GCGTATCTAC
CTGCTGTCGC GAATGATCAT GAAGTTGTCC GGGCAGCAGT GA
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| Protein sequence | MRSFSRTPLA AHLGLAFVLT ALTPMVMADP HKVIQADAEQ YQGEALKLLE RLVNIDSGSG
YVPGLTQVSD IAIEELKKLG ATIELVPNTP EASNHVLATL KGTGKAKILL MAHMDTVFKE
GSAAERPFHI KDGRAYGPGV MDDKGGIVAA IYALKVLHNL KFTDYAQITV LLDASEETGS
VVATELIKKT AREHDVTLNL EPGRPADGLV VWRKGSATAL VEVKGKASHA GVAPELGRNA
ATEVAHQILQ LGKLGDEEKK TTINFTVLKA GDRTNVIPDQ ASAKADVRAA VPEEFDRIEK
DLAKVSANKL VPDTEVKTSL VRGLPPMPQT AQSDALVAMA QGIYGELGRT LTIEGSGGAA
DSSLSASVGT PTLDGFGIVG GNIHTPEEYA EVGSVAPRIY LLSRMIMKLS GQQ
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