Gene PSPTO_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3232 
Symbol 
ID1184889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3651385 
End bp3651810 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content54% 
IMG OID637394583 
Producthypothetical protein 
Protein accessionNP_793017 
Protein GI28870398 
COG category[R] General function prediction only 
COG ID[COG3565] Predicted dioxygenase of extradiol dioxygenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.405864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTT CTCCTTTTCA CCTCGCAATC CCTGTATATG ACCTGGCCGC CACCCGGACT 
TTCTACGGTG AAGTCTTCGG GCTTGCCGAG GGGCGTTCCA GTGCGCAATG GGTGGACTTC
GATTTTTATG GCCATCAACT GGTCATTCAT GAACACCCGA AAACAGCGTC ACAGGAAAGC
GTGCACAGCA ACCCTGTGGA TGGTCATGAC GTGCCGGTTC CGCATTTCGG CATCATTCTG
CAATGGGCGC AGTGGGAAGC ACTGGCCGAG CGGTTGAGGT CATTCGACAC CAAATTTGTG
ATCGAACCCT ACATCCGCTT CAAAGGGCAG GTCGGCGAGC AGGCCACCAT GTTCCTGTTT
GATCCGTGCG GTAATGCGCT GGAATTCAAG GCGTTCAAAG ACATGAGCCA GTTGTTCGCC
AAGTAA
 
Protein sequence
MSLSPFHLAI PVYDLAATRT FYGEVFGLAE GRSSAQWVDF DFYGHQLVIH EHPKTASQES 
VHSNPVDGHD VPVPHFGIIL QWAQWEALAE RLRSFDTKFV IEPYIRFKGQ VGEQATMFLF
DPCGNALEFK AFKDMSQLFA K