| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3220 |
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| Symbol | |
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| ID | 1184877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3621993 |
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| End bp | 3623504 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394571 |
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| Product | ISPsy5, transposase |
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| Protein accession | NP_793005 |
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| Protein GI | 28870386 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.221861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA TGCCCGACAA CCTTCCCGAC GATCTCCAGC TGCTCAAACA AATGCTTGCG
AAGATGCAGT CGCGGGTCGG TTTTCTAGAA GAAGAGAACG CATTGCTGCG CCAGCGCTTG
TTCGGACGCA AGTCCGAGCA AACAGCCGAT CCGGCCACAC CGCAGTTGGC GCTCTTCAAC
GAAGCCGAAA GCGTCGTCGA AGCTATCGAC GAGAACGCTG AAGAAGAGGT TGTCACCCCC
GCTAAGCGCC GTGGCAAACG CAAGCCACTG CCTGCCGACC TGCCGCGCAT CGAAGTCATC
CACGAACTTC CCGAGCATGA ACTGACTTGC GTCTGCGGCT GCCGCAAACA CGCCATCGGC
GAGGAAGTCA GCGAGCAGCT TGAAATCGTG CCGATGCAGA TCCGGGTCAT CAAGCATGTT
CGTAAAGTCT ATGGCCGCCG CGACTGCGAA ACGGCACCCG TCACAGCAGA CAAGCCAGCT
CAACTGATTG AAAAGAGCAT GGCCAGCCCC AGCGTTCTGG CGATGTTGCT GACTACCAAA
TACGTTGACG GTTTACCGCT TCATCGATTT GAAAAAGTGT TGGGTCGCCA CGGTATCGAT
ATCCCACGCC AGACCCTGGC GCGCTGGGTG ATCCAGTGCG GCAAACACTT CCAACCGCTG
CTGAATTTGA TGCGCGACCG GCTACTGGAA AGCCGCTTCA TCCACTGCGA CGAAACGCGC
GTGCAAGTGC TGAAAGAACC AGATCGAGAA CCGAGCAGCC AATCCTGGAT GTGGGTGCAA
ACCGGCGGCC CACCGGATAG GCCGGTAATC CTTTTTGACT ACTCCACCAG CCGGGCGCAG
GAGGTGCCAA TGCGCCTGCT CGATGGTTAT CGCGGTTACG TAATGACCGA TGATTACGCC
GGTTACAACG CCTTGGGCGC CCAAACCGGA GTCGAGCGTC TAGGCTGCTG GGCGCATGCT
CGACGCAAGT TTGTTGAAGC ACAGAAAGTG CAGCCCAAAG GTAAAACGGG GCGTGCCGAT
ATCGCGCTGA ACCTGATCAA CAAACTGTAT GGGATCGAAC GCGACTTGAA GGCCAGTAGC
GACGCTGATC GTAAAATCGG CCGTCACGAA CATAGCCTGC CGATACTGGC TCAGTTGAAA
AGCTGGATCG AAAAGACGCA GCCACAGGTC ACCGCTCAGA ATGCCCTGGG CAAAGCCATC
AGTTACCTCG CAAGTAACTG GAGCAAGCTG GAGCGATACG TTGAGGAAGG CTACCTGCCG
CTCGATAACA ACACAGCTGA ACGCGCGATC CGCCCCTTCG TGATCGGAAG AAAGAACTGG
CTGTTTAGCG ACACGCCCAA GGGCGCGACG GCCAGTGCTC AACTGTACAG CCTGGTCGAG
ACTGCCAAAG CCAACGGCCA GGAGCCCTAT GCGTGGCTGC GCCACGCACT TGAACGCCTG
CCAACGGCAA CATCGGTTGA GGATTACGAA GCCTTGCTGC CGTGGAACTG CGAACCTCGA
CTTCACAGCT AA
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| Protein sequence | MKSMPDNLPD DLQLLKQMLA KMQSRVGFLE EENALLRQRL FGRKSEQTAD PATPQLALFN
EAESVVEAID ENAEEEVVTP AKRRGKRKPL PADLPRIEVI HELPEHELTC VCGCRKHAIG
EEVSEQLEIV PMQIRVIKHV RKVYGRRDCE TAPVTADKPA QLIEKSMASP SVLAMLLTTK
YVDGLPLHRF EKVLGRHGID IPRQTLARWV IQCGKHFQPL LNLMRDRLLE SRFIHCDETR
VQVLKEPDRE PSSQSWMWVQ TGGPPDRPVI LFDYSTSRAQ EVPMRLLDGY RGYVMTDDYA
GYNALGAQTG VERLGCWAHA RRKFVEAQKV QPKGKTGRAD IALNLINKLY GIERDLKASS
DADRKIGRHE HSLPILAQLK SWIEKTQPQV TAQNALGKAI SYLASNWSKL ERYVEEGYLP
LDNNTAERAI RPFVIGRKNW LFSDTPKGAT ASAQLYSLVE TAKANGQEPY AWLRHALERL
PTATSVEDYE ALLPWNCEPR LHS
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