| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3197 |
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| Symbol | |
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| ID | 1184854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3590420 |
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| End bp | 3591976 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394551 |
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| Product | hypothetical protein |
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| Protein accession | NP_792985 |
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| Protein GI | 28870366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0388664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCAG CAAACAACGT TCAGGCGTCG TCCAAAGCCA GGCGGTGGGG ACAGTTGTTT
GCCGCCTGCC TGACCGGGAT CCTCATCCCC TTGTGTTTTA CCGGCCCCGC CGTGGTCTTG
CCGTCGATCA ACCAGGCGCT GGGCGGGTCG GCGGTCGAGC TGACCTGGGT CATCAACGCT
TACATCCTCA CGTACGGCAG CGCCATGATG GCCGCCGGGA GCCTGACCGA CATTTATGGC
AGAAAGCGGA TATGGCTGAT TGGCCTGGTG ATATTCGTCG TGTCCACCAG TGCCATTCCA
GCAGCGTCAT CTGTTGTGCA GATCGATGTA CTGCGCCTGA TTCAAGGGCT GGGTGGCGCC
GCAGCGTTTG CCGGGGCCAT GTCGTCGCTG GCGCAGAGCT TTCATGGCGC TGATCGCACC
CGGGTGTTCA GCCTGCTGGG CACCACGTTT GGCATCGGCC TGGCATTCGG CCCCCTGGCG
GCCGGCGCGC TGGTGGATTC GGCAGGCTGG GAATGGTCAT TTCTGGCCAC CGCACTGATT
GGTGCACTCG GCTTTGTACT GGTGCTGTTC AGCGCGACCG AATCCCGAGA CCCGGAGGCC
CGAGGCATGG ATTGGCCGGG CGCGATCAGC TTCACCGCGG CACTGACCCT CTTCACCTAC
GCCATCCTGC TTGCCCCGGA AGACGGCTGG GCCCATCCGC AGGTCTGGGG CGGCATCATC
GGCTCAATCG TGCTGTTGTG GATCTTTATC GTGGTCGAAC GTCGCACCGC CCGACCGATG
CTGGACCTGT CGCTGTTCAA GAGCCCGCGT TTTGTCGGCG TGCAGATTCT CGCCGCCAGC
CCGGCATTTT TCTTCGTGAT CCTGATCATC ATGCTGCCGG CCAGGTTCAT CGGCATCGAT
GGCCTAAGCG CTCTTGAAGC GGGACAGATG ATGACCGCGC TCGCCGCACC GTTGCTGATT
GTGCCGATGC TTGCGGCGCA GCTGGCGCGG CGCTTCACCT CCGGCGTGCT GTCGGGCGTG
GGGTTAGTGC TGGTGGCAGC GGGCCTGGCC TGGCTAGCGC TGGTGCTGGA CAGCGGTGCG
ACCCGCATGG CCCTGCTGCC GATGGCGTTG ATTGGTATCG GTATCGGCCT GCCCTGGGGT
TTGATGGATG GCATGGCGGT CAGTGTCGTG GAAAAGGAAC GGGCTGGCAT GGCGACCGGC
ATTTTCAATG CGGTGCGTGT TTCAGCTGAT GGCATCGCCA TCGCGCTGGC CGGTGCGCTG
CTCGCGACGT TCATTCAATG GAGTTTGTTC GGCGCGCTGA ATGGCGTCGC GCCTGAGGTT
CTGACCGAAG CGGCCAATCG CGCGGCGCTG GGCGATCTGC AAAGTGCGGT TGATGCCCTC
CCCGGCCAGT CGGACCTGCT GCATCAGCAT TACGCCACGG CCTTTCGCAA CCTGCTGTTC
ATCCTCAGTG TCGCCAGCTT GCTGACCGCC GCAGCGGTTT TCACGCTGCT GGGCCGTGTG
CATGCCCACG AAGAGCTGCC GCAGGACTCT TCCGGTCTGG CGGGGCAAAC CAAATGA
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| Protein sequence | MTSANNVQAS SKARRWGQLF AACLTGILIP LCFTGPAVVL PSINQALGGS AVELTWVINA
YILTYGSAMM AAGSLTDIYG RKRIWLIGLV IFVVSTSAIP AASSVVQIDV LRLIQGLGGA
AAFAGAMSSL AQSFHGADRT RVFSLLGTTF GIGLAFGPLA AGALVDSAGW EWSFLATALI
GALGFVLVLF SATESRDPEA RGMDWPGAIS FTAALTLFTY AILLAPEDGW AHPQVWGGII
GSIVLLWIFI VVERRTARPM LDLSLFKSPR FVGVQILAAS PAFFFVILII MLPARFIGID
GLSALEAGQM MTALAAPLLI VPMLAAQLAR RFTSGVLSGV GLVLVAAGLA WLALVLDSGA
TRMALLPMAL IGIGIGLPWG LMDGMAVSVV EKERAGMATG IFNAVRVSAD GIAIALAGAL
LATFIQWSLF GALNGVAPEV LTEAANRAAL GDLQSAVDAL PGQSDLLHQH YATAFRNLLF
ILSVASLLTA AAVFTLLGRV HAHEELPQDS SGLAGQTK
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