Gene PSPTO_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3174 
Symbol 
ID1184831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3566109 
End bp3566426 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content56% 
IMG OID637394530 
Producthypothetical protein 
Protein accessionNP_792964 
Protein GI28870345 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.200573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA AGACCTCTGC TCAAAATGCT GCCGATCAGA TCAAGGATCA GGCATTCAGC 
GACCTGCAGG CGCTGATCGA AGAATCAGAC AAATTGCTCA AGGAAAGTGC CGCACTGGTC
GGCGAAGAAG CTGAAACGCT GCGCGCGCAG TTGAGTGTCA AGCTCAAGCA GGCACTGGAC
TCGATGGCCA GCGTACGTGA CCGCACCAAG CCGGTTGTAG AAGCGACCGA GACTTACATC
GGTGGCCATC CTTGGCAGAC CGTGGCTATT TCTGCAGGCT TCGGTCTGGT AGTAGGCCTG
TTGCTGGGTC GTCGTTGA
 
Protein sequence
MARKTSAQNA ADQIKDQAFS DLQALIEESD KLLKESAALV GEEAETLRAQ LSVKLKQALD 
SMASVRDRTK PVVEATETYI GGHPWQTVAI SAGFGLVVGL LLGRR