Gene PSPTO_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3160 
Symbol 
ID1184817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3553049 
End bp3553594 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID637394516 
Producttranscriptional regulator, putative 
Protein accessionNP_792950 
Protein GI28870331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0108534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCA AAGAAGCAGT ACGCACCGGA GGCCGCAGCG CCCGGGTGCA GGAATCCATT 
CACCGCGCCG TTCGGGACTT ACTCGAAGCG CATGATCGCG CGGCGCTCAG CGTGCCCATG 
ATTGCGGCTC AGGCCGGCGT CACGCCGTCA ACCATCTACC GCCGCTGGGG CGATTTGACC 
ACGTTGCTGG CCGACGCCGC CATCGAGCGC CTGCGTCCCG ATACGCCGAT TGATCAAGGC 
AGCCTGCGTC AGGACCTGTT GAGCTGGAGC GAGATGTACC TGGACGAAAT GTCCTCGGCA 
CCAGGTAGGG CGCTGATGCG CGATGTGGCC GCCAGCACCT CGGGCTGTGT GGGCAAGTGC 
GCGGCAATGG TCCGTGAGCA ATTGCAGATC ATGATTGACC GCGCCACAGA GCGTGGCGAA 
GCCTCACCGA CTGCGGACGA TCTGATCGAC GCCATCGTTG CACCGATGAT CTACCGGATT 
CTGTATTCCG AAGCCGCTCC AACACTGGAA CGTGTACACC AATGGGTAAA CCGCTGCCTG 
GGCTGA
 
Protein sequence
MAIKEAVRTG GRSARVQESI HRAVRDLLEA HDRAALSVPM IAAQAGVTPS TIYRRWGDLT 
TLLADAAIER LRPDTPIDQG SLRQDLLSWS EMYLDEMSSA PGRALMRDVA ASTSGCVGKC 
AAMVREQLQI MIDRATERGE ASPTADDLID AIVAPMIYRI LYSEAAPTLE RVHQWVNRCL 
G