Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3156 |
Symbol | |
ID | 1184813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3548894 |
End bp | 3549361 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394513 |
Product | transcriptional regulator, AsnC family |
Protein accession | NP_792947 |
Protein GI | 28870328 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000033258 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTTA AATTGAGCCC CATCGATCGC AGGATTCTTC GCCTGCTGCA ACATGACGCC AGCCTCTCGG CGGCAGAAAT CGCGGAACGT GTAGAGCTGT CGCAATCACC CTGCTGGAGG CGTATTCATC GGCTGCAGGA GGACGGCGTG ATCGAGCGCA CGGTCGCCCT GCTCAGCACG CAAAAACTCG GCCTGAGCAT GACCGTCTTC GTCGAGGTCA AGCTGTCGGG GCATGGCCGG CGTTATCTGG CCGAATTCGA AGAGGCGATC ATCGGCCACC CCGAGGTGCT GGAGTGCTAC ACAATGGCGG GCGGGATGGA CTTCATGCTC AAGGTGGTGG CTCAGGACAT CGCCAGCTAT GAGCGCTTTC TGCGCGACCA CCTGCTGCAA TTGCCCCACG TGCACGAGGC GCATTCGAAT ATCGCCATGA GCACGGTGAA ACGCACCACA GAGCTGCCGC TGGATTAG
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Protein sequence | MQLKLSPIDR RILRLLQHDA SLSAAEIAER VELSQSPCWR RIHRLQEDGV IERTVALLST QKLGLSMTVF VEVKLSGHGR RYLAEFEEAI IGHPEVLECY TMAGGMDFML KVVAQDIASY ERFLRDHLLQ LPHVHEAHSN IAMSTVKRTT ELPLD
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