| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3152 |
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| Symbol | |
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| ID | 1184809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3543110 |
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| End bp | 3543832 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637394510 |
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| Product | hypothetical protein |
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| Protein accession | NP_792944 |
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| Protein GI | 28870325 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5446] Predicted integral membrane protein |
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| TIGRFAM ID | [TIGR02458] cobalt transporter subunit CbtA (proposed) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00956789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCAAGC GAATCGCACA GACCGCAGGG TTTACCGGGC TGTTGGCCGC CCTGCTGCTG
ACCTTGCTGC AAAGCTTCTG GGTCGTCCCG CTGATCCAGC AGGCAGAAAC CTACGAGAAA
GCACCTGCCG AACACGTTCA CGAGCATGCC GACGGTGCCG TGGCTGAACA CAGCCATGCG
CATGACGAAG CAGCGTGGGA GCCGGAAAAC GGCTGGCAGC GCGTGCTGTC CACCACCGGT
GGCAATCTGG TGGTCGCCGT CGGTTTTGCC CTGATGCTGG CCGGGCTTTA CACCCTGCGC
GCACCGGGCC GCACGGCACA GGGCGCGTGG TGGGGGCTGG CCGGTTTTGC CGTGTTCGTG
CTGGCGCCGA CCCTGGGGCT GCCGCCTGAG CTGCCGGGCA CCGCTGCCGC AGAACTGAGC
CAGCGTCAGC TTTGGTGGAT CGGTACCGCA GCGTCCACCG CTGCCGGGCT GGCCTTGCTG
GTGTTTGGTC AGAACTGGCT GCTCAAAGTG CTGGGCGCGG CGATTCTGGT GGTGCCGCAT
GTGATCGGCG CACCGCAACC GCTGGTTCAT GAAAGCCTTG CGCCTGAAGC ACTGGAATCG
CAGTTCAGGG TCGCTTCGCT GCTGACCAAC GCGCTGTTCT GGGTTGCACT GGGCCTGATC
AGCGCCTGGC TGTTTCGCAG AAGCAATGTT CACACAGATA ATGCCCACTC AAACCATGCC
TGA
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| Protein sequence | MFKRIAQTAG FTGLLAALLL TLLQSFWVVP LIQQAETYEK APAEHVHEHA DGAVAEHSHA
HDEAAWEPEN GWQRVLSTTG GNLVVAVGFA LMLAGLYTLR APGRTAQGAW WGLAGFAVFV
LAPTLGLPPE LPGTAAAELS QRQLWWIGTA ASTAAGLALL VFGQNWLLKV LGAAILVVPH
VIGAPQPLVH ESLAPEALES QFRVASLLTN ALFWVALGLI SAWLFRRSNV HTDNAHSNHA
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