Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3135 |
Symbol | |
ID | 1184792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3524581 |
End bp | 3525600 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394493 |
Product | hypothetical protein |
Protein accession | NP_792927 |
Protein GI | 28870308 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0222063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTTT GCCTGCTCGA TAGCCTGATT TCGGTGCACG CTCAGGCGGA TGAAGCCTGG AGCGCGGGCT ACCGCGCACT GAGTTTCCCC GACCCGCTGG ATTCACAGCC CGTGCAGGCC ATTGCGTTCT ACCCCTCAAC CGGCAGCGAA CATCTGAGCA TCATTCACGG CTACCGCGTC GAAGCCAGTG AAGATGCGCC GATTGCGATG GGCCGCTTCC CGTTGTTGCT GCTGTCCCAC GGCAACACCG GCACGCCGCT GGCGCTGCAC GATCTGGCAA CGTCGCTCGC CCGCCAAGGC TTTGTGGTGG TGGCGGTGGT GCACCCCGGC GACAACGACC GTGATCACAG TCGCCTGGGC AGTTTGAGCA ATTTGTATGG CCGCCCATTG CAGATCTCCG AAGCCATCAG CACCGCCTTG CTCGACCCCG TACTCGCGCC TTATCTCAAT GCCCGTCAGG TGGGCGTGAT CGGCTACTCC GCAGGCGGCG AGACCGCGCT GATACTGGCA GGCGCGCAAC CTGACCTGCA GCGCCTGCGC CAATACTGCC TGGAACGCCC GACAGACCGT GACGCCTGCA AGACTCAGGG CGAGCTGGTT GCCGACCGGG ATGACTTGCA CGCCCAGGCT GACCCTCGGG TCGGTGCGCT GATGTTGATG GCACCGTTGA GCCTGATGTT TGGCCGTCAC ACACTGGGTG ATGTCCATGT GCCGGTGCTG ATGTACGCCG GCGATGACGA TCAACTGTTG GCGCTCGACA GAAATGCCGA AGCGCTGGCG CGCAAGCTGC CACAGGCACC GGACTACAAG CTGTTGGCGG GGGCAGGGCA CTTTGTCTTC ATGGCACCGT GCAGTGACGA GCAACGCGAG GCCGCCCCGT TACTGTGCAA CGACCCGGAC GGTGTGGACC GCGAAGACAT TCACCGCAAC CTGAGTGCCG AAGCCGTGCG GTTTTTCAGC GCAGCACTCA ATTCCGCCGA TGCTGATCAT TCAGGCATGC AAACTGCCCA TCATCAGTGA
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Protein sequence | MLVCLLDSLI SVHAQADEAW SAGYRALSFP DPLDSQPVQA IAFYPSTGSE HLSIIHGYRV EASEDAPIAM GRFPLLLLSH GNTGTPLALH DLATSLARQG FVVVAVVHPG DNDRDHSRLG SLSNLYGRPL QISEAISTAL LDPVLAPYLN ARQVGVIGYS AGGETALILA GAQPDLQRLR QYCLERPTDR DACKTQGELV ADRDDLHAQA DPRVGALMLM APLSLMFGRH TLGDVHVPVL MYAGDDDQLL ALDRNAEALA RKLPQAPDYK LLAGAGHFVF MAPCSDEQRE AAPLLCNDPD GVDREDIHRN LSAEAVRFFS AALNSADADH SGMQTAHHQ
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