Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3124 |
Symbol | |
ID | 1184781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3509337 |
End bp | 3509828 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637394482 |
Product | acetyltransferase, GNAT family |
Protein accession | NP_792916 |
Protein GI | 28870297 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0505019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCC CCGAGGTACT GGTACTGCAA GCGAGTTATA CAAATCCTGT GCACGCTGAC GCAATCGGAT TTGTCTTGAA CGAATATTCG ATGGATGTCA TGGGGGCGGG CAAGTCGCTG TCCAGTGATA CCCGGCAGCA ACTGGCCATA GAGCTGGCCA AGCGTCCACA TGCCTTCAGC GTGCTGGCCT TTATTTCCGG CGAGCCGGTC GGGCTGGTCA ACTGCTTCGA AGGTTTTTCA ACCTTTGCTT GCCGCCCTCT GGTCAACATT CATGACGTGG CGGTGGTCTC GCAATATCGT GGTCTGGGTA TCAGCCACAA AATGTTGCTC AAAGTGGAAG AAATTGCCCG TCAACGCGGT TGCTGCAAGC TGACCCTTGA AGTGCTCGAG GGCAACGACG TGGCGCAAGG CGCTTATAAA AAGCTAGGCT TCGATAATTA TCAGCTGAAC CCTGAAATGG GGCGTGCGAT GTTCTGGCAG AAGTCGCTCT AG
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Protein sequence | MEAPEVLVLQ ASYTNPVHAD AIGFVLNEYS MDVMGAGKSL SSDTRQQLAI ELAKRPHAFS VLAFISGEPV GLVNCFEGFS TFACRPLVNI HDVAVVSQYR GLGISHKMLL KVEEIARQRG CCKLTLEVLE GNDVAQGAYK KLGFDNYQLN PEMGRAMFWQ KSL
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