| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3116 |
|---|
| Symbol | |
|---|
| ID | 1184773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 3502271 |
|---|
| End bp | 3502576 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637394474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_792908 |
|---|
| Protein GI | 28870289 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0194652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCG TACACCAGCG TGAGCATCTC AACGAGGACG ACCTGGTCGT TATCGAGTGC
TCCCAGACCT GCAATATTCG CCTGATGAAC GATGCGAATT TCCGCAGCTT CAAAAACGGT
GGTCGGCACA CGTATCACGG CGGTGCGTTT GACACGTTCC CGGCCAAGAT CGCTGCACCC
AGCACTGGCT TCTGGAACAT CACCATCGAT ACCGCAGGCC GCAAGGTCGA TACCAACGCC
GGACGCAAAC CGCCTTTTAC CCACAAAATC AAAATCGTCC GGCGCTCGAC CTCTCGCCTG
GGATGA
|
|---|
| Protein sequence | MKFVHQREHL NEDDLVVIEC SQTCNIRLMN DANFRSFKNG GRHTYHGGAF DTFPAKIAAP
STGFWNITID TAGRKVDTNA GRKPPFTHKI KIVRRSTSRL G
|
|---|
| |