| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3111 |
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| Symbol | |
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| ID | 1184768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3497402 |
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| End bp | 3498673 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394469 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_792903 |
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| Protein GI | 28870284 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.019274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTGC ATCCGACCAG CCAGGACTGT GTGGTCGAGC AGTCTGTCGA TGCGCTGCGT
GAGCGCGAGC GTCGGTTCAG GATGCTGGCT GACAACATGA GTCAGCTGGC CTGGACTGCC
AGCCCGCGTG GTCAGGTCCA GTGGTACAAC GAGCGCTGGT ACGCTTACAC CGGTGCTACG
CTGGAGGCCA TGGTGGCGCT GGGCTGGCGC TCGGTCGTGC ACCCCGAGCA TCGCGAGCGG
GTGATGGCAC GCTTGCAATA CTGCTTTGCC ACCGGCTCTG TCTGGGAGGA CACCTTTGCC
CTGCGCGGCA AGGACGGTGC CTTCAACTGG TTTCTGTCAC GCGCACTGCC CATGCGCGAT
GCACAAGGGC ACATCACCCA CTGGCTGGGT ACTCACACCG ACATCACCGC TCAGGTCAAT
GCCGAAGAAG CGTTGCGCGA ACTCAACGAA AGTCTGGAGT TGCGCGTGGC TGAGCGTACC
CGCGAACTGG CAAAGGCCAA TGAGTTGTTG CAGGTCGAGA TCGCGGAGCG GGCTCAGGCT
GAAGAGGTGT TGCGCCATGC ACAGAAAATG GACGCCATCG GTCAATTGAC CGGCGGCATC
GCCCATGACT TCAACAACAT GCTGTCCGGG GTGCTCGGCG CGCTGGATAT GATCAGGCTG
CGTATAGGGG CGCAGCGCTT CGGTGAGGTG GATCGCTACG TTGACGCTGC GGTCAGTTCA
GCTAATCGTG CTGCTGCGCT GACCCAGCGA CTGCTGACCT TTGCCCGCCG TCAGTCACTC
AGCGTCGGTA CGGTGGATAT CAATTGCATG GTGCGCTCGA TGGAAGAGTT GCTGCGCGGC
ACGGTCGGTA ATCATGCGCA ATTGCACATT GAGCTGGAGG AGGGGCTGAG CGCCATTCAG
ACTGACGAGC ATCAGCTGGA AAACGCGCTA TTGAACCTGG TGATCAACGC GCGTGATGCC
GTGCCTGTCG CCGGTCTGAT CAGTGTTCGC AGTCAGGCTT TGCGGCTTGT TGCGCAGGAA
GGGGCGTTGG CCGCAGGTGA CTATGTGCGG CTCAGTGTCG AAGACAATGG CTGTGGAATT
GCCCAAGATG TCATTGATCG AGTGTTTGAC CCGTTTTTCA CGACCAAGCC TGTTGGCCAG
GGAACAGGCC TGGGCCTGTC AATGGTTTAC GGTTTCATCA AGCAGACTGG CGGGCATGTG
CAGATAAAAA GCGAGCAGGG TCAAGGCACG CGGATTTGTC TGTACCTGCC GTGTGGCGCA
GCGACTGCCT GA
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| Protein sequence | MPLHPTSQDC VVEQSVDALR ERERRFRMLA DNMSQLAWTA SPRGQVQWYN ERWYAYTGAT
LEAMVALGWR SVVHPEHRER VMARLQYCFA TGSVWEDTFA LRGKDGAFNW FLSRALPMRD
AQGHITHWLG THTDITAQVN AEEALRELNE SLELRVAERT RELAKANELL QVEIAERAQA
EEVLRHAQKM DAIGQLTGGI AHDFNNMLSG VLGALDMIRL RIGAQRFGEV DRYVDAAVSS
ANRAAALTQR LLTFARRQSL SVGTVDINCM VRSMEELLRG TVGNHAQLHI ELEEGLSAIQ
TDEHQLENAL LNLVINARDA VPVAGLISVR SQALRLVAQE GALAAGDYVR LSVEDNGCGI
AQDVIDRVFD PFFTTKPVGQ GTGLGLSMVY GFIKQTGGHV QIKSEQGQGT RICLYLPCGA
ATA
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