Gene PSPTO_3106 details

Gene Information

• Locus tag: PSPTO_3106
• Symbol: gloA
• ID: 1184763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 3492265
• End bp: 3492786
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637394464
• Product: lactoylglutathione lyase
• Protein accession: NP_792898
• Protein GI: 28870279
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0346] Lactoylglutathione lyase and related lyases
• TIGRFAM ID: [TIGR00068] lactoylglutathione lyase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00041709
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTGC ACGAACTCAA CACACTACCG GGCGTGACAG CCAACCCTGA AGCGCCTACC 
CGGCAGTTTG TGTTCAATCA CACCATGCTG CGCGTCAAGG ACATCACCCA ATCGCTGGAC 
TTCTACACCC GCGTGCTGGG CTTCAGCCTG GTTGAAAAAC GTGACTTCCC GGAAGCTGAG 
TTCAGCCTGT ATTTCCTTGC CCTGGTGGAC AAGGCACAAA TCCCGGACGA CGACGCTGCA 
CGCAACGAGT GGATGAAATC GATCCCGGGC ATTCTGGAGC TGACCCACAA CCACGGGACA 
GAAAGCGATG CGAACGCCTC GTATCACAAC GGCAACAGCG ACCCGCGCGG CTTTGGTCAC 
ATCTGCGTGT CCGTACCCGA CGTAAAGGTC GCCTGCGAGC GCTTCGAAGC GTTGGGTGTG 
GACTTTCAGA AACGCCTGTC CGATGGCCGC ATGAACAGCC TGGCGTTCAT CAAGGACCCG 
GACGGCTACT GGGTAGAGAT CATCCAGCCG ACACCACTCT GA 

 

Protein sequence

MSLHELNTLP GVTANPEAPT RQFVFNHTML RVKDITQSLD FYTRVLGFSL VEKRDFPEAE 
FSLYFLALVD KAQIPDDDAA RNEWMKSIPG ILELTHNHGT ESDANASYHN GNSDPRGFGH 
ICVSVPDVKV ACERFEALGV DFQKRLSDGR MNSLAFIKDP DGYWVEIIQP TPL