| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3085 |
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| Symbol | |
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| ID | 1184742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3466592 |
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| End bp | 3467257 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394445 |
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| Product | glutamine/glutamate ABC transporter, permease protein |
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| Protein accession | NP_792879 |
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| Protein GI | 28870260 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.136089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTTCG ATTACGCGTT CGCCCTTTCC ACGTTGCCTG CGTTTCTCAA AGCCGTTGGT
GTCACCCTTC AAGTAGGGCT GATTGCGATT CTGACCTCGC TGAGCGTGGC GATCATCAAT
GCAGCGATTG CCATGTTTCG GGTGCCGGTG TTGCACCGTT TGGTGCCGGT GTACGTCGAA
CTTGCCCGTA ACACGCCGTT GCTGATCCAG CTGTTTTTCA TCTACTTCGC TTTGCCGACG
ATGGGCATTC GCGTGTCGGG CTTTGCCTCG GCGGTGATCG CCATGACGTT CCTCGGCGGT
GCTTACCTGA CCGAGATCCT GCGGGCGGGG ATTGAAGCGG TGCCCAAGGC GCAGATCGAG
TCCGGCCTGT CCATCGGGTT GTCTCGCTGG CAGTTGCTGC GGCACGTCAT TCTGCCGCAG
GCGGGCATCC TCAGCCTGCC GGCACTGTTC GCCAACTTTG TCTTCCTGCT CAAGGAAACC
ACCGTGGTGT CGGCGGTTGC GGTACCGGAA ATTCTGTACA CCACCAAAAG CTATATCGCG
CTGTATTACA AGACCTACGA GATGCTTGCG GTGATGACCG GCCTGTGTGT GCTGTTGTTC
CTGCCGTTGT CGCTGCTGCT TGGCCTTTTG GAAAGGAGGC TCCAGCATGG CCAGTTCGGG
TCTTGA
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| Protein sequence | MTFDYAFALS TLPAFLKAVG VTLQVGLIAI LTSLSVAIIN AAIAMFRVPV LHRLVPVYVE
LARNTPLLIQ LFFIYFALPT MGIRVSGFAS AVIAMTFLGG AYLTEILRAG IEAVPKAQIE
SGLSIGLSRW QLLRHVILPQ AGILSLPALF ANFVFLLKET TVVSAVAVPE ILYTTKSYIA
LYYKTYEMLA VMTGLCVLLF LPLSLLLGLL ERRLQHGQFG S
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