Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3084 |
Symbol | |
ID | 1184741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3465952 |
End bp | 3466611 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394444 |
Product | glutamine/glutamate ABC transporter, permease protein |
Protein accession | NP_792878 |
Protein GI | 28870259 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.14393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGTT CGGGTCTTGA ATTGTTGTGG GTGTCGGCGC CGCAATTGAT CACCGGGGCA GGCCGAACGC TGGGAATTTC GCTGCTTGCG ATCGTCTTCA GCAGTGTGGG TGGCCTGTGT TACGGCGTGT TGCGCAGCCT CGGCAAGCGT TGGCTCGAGA TACCGCTGCG CATTTATCTG GAGCTGTTCC GGGCGATCCC CGTGCTGGTC TGGTTGTACC TGTTCTTCTT TGGCTTGCCG ATCTTCTTTG GCCTGAGCAT TCCGGCGTTC TGGTGCGCGG TTCTGGTGTT GTCGCTGTGG GGGGCCAGCG AGGTCGGCGA AGTGGTGCGC GGCGGGCTGC GTTCCATCCC GCGCGGGCAA CGTGAAGCGG GCTTGGCGAT CGGCCTCGGT CTGGGCCAGC TGTATGGTCG AGTGCTTTTG CCGCAAGCGC TCAAGCGCCT GACGCCGCCG GTGATCAATG TCTACACGCG CCTGATCAAG ACCAGTTCGC TGGCAGTGTT GATCGGCGTC ATCGACATCA CCAAGGTCGG CCAGCAGATT ATCGAGCGCA CTTATGAGTC GGTGCTGATC TACGGCTTTC TGTTTTTGTT CTTTTTTATC GTCTGCTATC CGCTGTCAGC CGCCTCGCGC GTGCTTGAAG GGCGCTGGAA TCACGCATGA
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Protein sequence | MASSGLELLW VSAPQLITGA GRTLGISLLA IVFSSVGGLC YGVLRSLGKR WLEIPLRIYL ELFRAIPVLV WLYLFFFGLP IFFGLSIPAF WCAVLVLSLW GASEVGEVVR GGLRSIPRGQ REAGLAIGLG LGQLYGRVLL PQALKRLTPP VINVYTRLIK TSSLAVLIGV IDITKVGQQI IERTYESVLI YGFLFLFFFI VCYPLSAASR VLEGRWNHA
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