Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3083 |
Symbol | |
ID | 1184740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3465194 |
End bp | 3465955 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394443 |
Product | glutamine/glutamate ABC transporter, ATP-binding protein |
Protein accession | NP_792877 |
Protein GI | 28870258 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.262111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAT TGATCGAACT GTCCGGTTTC AGTAAAAACT TCGGTGCTAC GCCGGTATTG CGAGACATCG ACCTGAAGGT GCAGGAGGGC GAGGTCGTGG TGATTCTCGG CCCCAGCGGT TGCGGCAAGA GCACCTTGCT GCGTTGCCTC AATGGTCTGG AGCTGGGCCA CGCGGGCACT CTGCATTTTG CCGGCAAGGC GCTGCCGGCC AACGCCGACT GGCGGCTGGT GAGGCAGCAG ATCGGCATGG TGTTTCAGAG CTATCACCTG TTTCCACACA TGACTGTGCT CGATAACATC CTGCTCGGCC CGTTGCGCGT GCAAAAGCGT GCGGCGGTCG AGGCCCGTCA GCAGGCTGAA GCGCTGCTGG AACGGGTGGG CCTGGCCGAC AAACGCGACG CCTATCCACG CGAGCTGTCC GGCGGCCAGC AGCAGCGTAT CGCCATCGTA CGTGCGCTGT GCATGAACCC CAAAGTCATG CTGTTCGATG AAGTCACTGC AGCTCTTGAT CCAGAGATGG TCAAGGAAGT GCTGGAAGTG ATCCTCGATC TGGCACAGGG CGGCATGACC ATGCTCATCG TCACCCATGA AATGGCCTTC GCGCGAGCGG TGGCCGACCG AATCCTGTTC ATGGACCGTG GAATCATCGC GGAACAGAAC GACCCTGAAA CTTTCTTCAG CGCCCCGCAG ACCGCACGCG CGCAGCAGTT CCTGGAGAGG TTCTCCTACG TGGAAAACAT GCCAAAAAGG AAAGCATCGT GA
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Protein sequence | MSTLIELSGF SKNFGATPVL RDIDLKVQEG EVVVILGPSG CGKSTLLRCL NGLELGHAGT LHFAGKALPA NADWRLVRQQ IGMVFQSYHL FPHMTVLDNI LLGPLRVQKR AAVEARQQAE ALLERVGLAD KRDAYPRELS GGQQQRIAIV RALCMNPKVM LFDEVTAALD PEMVKEVLEV ILDLAQGGMT MLIVTHEMAF ARAVADRILF MDRGIIAEQN DPETFFSAPQ TARAQQFLER FSYVENMPKR KAS
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