Gene PSPTO_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3078 
Symbol 
ID1184735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3461005 
End bp3461391 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content53% 
IMG OID637394438 
Producthypothetical protein 
Protein accessionNP_792872 
Protein GI28870253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA ACATCAAAGC CGTACCCACC AGCGATTACA ACGCCGTCAT CGCAACCGCC 
AGCAAATACG TAGAGGGCTT GCGTAGCGGT AGCGTCGCCA CTATCGAAGA AGCGTTCCAC
AAGGATGCGG TGATGTATGG CTTCACCAAC GGTCAACTAT TGGGCGGCCC GATCAGCAAC
CTGTACACGT TTGTCGAAAC CAACGGCACT GCGCCCGATA TCACAACGCG CCTGGACATA
CTTGCCATCA CTCCAACCAC CGCAGTGGTA CGCATTGACA TGGAAAAGGA TGCGATCGGT
GCTGACTACA ATGACTACCT GACGCTGATA AGAATCGATG GCACCTGGAA AGTGATTGCC
AAGGTTTACC ACCAGTTTGA AGGTTGA
 
Protein sequence
MSKNIKAVPT SDYNAVIATA SKYVEGLRSG SVATIEEAFH KDAVMYGFTN GQLLGGPISN 
LYTFVETNGT APDITTRLDI LAITPTTAVV RIDMEKDAIG ADYNDYLTLI RIDGTWKVIA
KVYHQFEG