Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3077 |
Symbol | |
ID | 1184734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3459847 |
End bp | 3460950 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637394437 |
Product | NADH:flavin oxidoreductase / NADH oxidase family protein |
Protein accession | NP_792871 |
Protein GI | 28870252 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACT TGAGTAAGGC CACCGACCTT TTCTCTCCCG TGCAGATGGG CTCGATCGAT CTGGCGAACC GGATTGTGAT GGCGCCTGTG ACACGCAGCC GCTACGCCGA GGACGGTGTG CCAAAAGACC TGCACGCCAC CTACTATGCG CAACGTGCGA CGGCAGGAAT GATCGTGGCC GAAGCAACCA ACATTTCCGC TCAAGGCCGG GGCTACGCCG CAACGCCCGG GATCTGGAAC GAGAAGCAAG TGGCGGGCTG GCGGAAAGTG ACCGACGCGG TGCATGCCGC CGGTGGCAAG ATCGTCAGCC AGCTCTGGCA CGTTGGCCGG TTCTCCGGTG TTGATCTGCA ACCCGGCGGG GAAGCCCCGG TAGCGCCCTC CGCCCTCCAG GCTGAAGGCA ACACCTATAC CGTCGACGGT TTTGTGCCTG TGTCCATGCC GCGCGCGCTG GAAACCGATG AAATCTCCGG CATCATCGCG CAGTACAGGC ACGCAGCCGA GAACGCCAAG CGAGCCGGTT TTGATGGCGT TGAAGTGCAC TCGGCCAACA GCTATCTGCT CGACCAGTTT CTGCGCGACT CCACCAATCA ACGCACCGAT CACTACGGCG GTTCGATAGA AAACCGCGCC CGCCTGACAC TGGAAGTGAC CCAGGCCATC GTGGACATCT GGGGCAATGA CCGGGTCGGC ATTCGCTTGT CACCGGTGAC GCCCGATGCG GGCAACACCG CGCCGGACAG CAACGTAATG GGCCTGCACG GTTATCTGAT CCAGCAGTTG AACACGCTCA ATCTTGCGTA TCTGCACTTC GTCGAGGGCG CAACCGCCAC GTCCCGCGAA GTGCCGGAAG GGGTCGATAT GGACGCCCTG AGCGCTCAGT TCCACGGCCC GTTCATTGGC AACAACAACT ACGACCTTGA GATGGCGGTC GAGCGCCGGG CGCAAGGCAA GATCGACGCG GTCGCATTCG GCCGCCTGTT CATCTCCAAC CCCGACCTGG TTGCCCGCCT GTTTCATGGG GCCGAACTGA CCATTGCCCC ACGTGAGTCG TACTACGGCG GGGGTGCCAA AGGCTACACC GACTGGCCGC TCGGTCAGTA TTGA
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Protein sequence | MNDLSKATDL FSPVQMGSID LANRIVMAPV TRSRYAEDGV PKDLHATYYA QRATAGMIVA EATNISAQGR GYAATPGIWN EKQVAGWRKV TDAVHAAGGK IVSQLWHVGR FSGVDLQPGG EAPVAPSALQ AEGNTYTVDG FVPVSMPRAL ETDEISGIIA QYRHAAENAK RAGFDGVEVH SANSYLLDQF LRDSTNQRTD HYGGSIENRA RLTLEVTQAI VDIWGNDRVG IRLSPVTPDA GNTAPDSNVM GLHGYLIQQL NTLNLAYLHF VEGATATSRE VPEGVDMDAL SAQFHGPFIG NNNYDLEMAV ERRAQGKIDA VAFGRLFISN PDLVARLFHG AELTIAPRES YYGGGAKGYT DWPLGQY
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