Gene PSPTO_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3076 
Symbol 
ID1184733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp3459207 
End bp3459788 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID637394436 
Producttranscriptional regulator, TetR family 
Protein accessionNP_792870 
Protein GI28870251 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.192901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAC CAGTCCACGA CATGCGCCAG CACATCATCG ATGTTGCCAG GTCACTGATG 
ACGAACAAAG GCTATACCGC TGTCGGTCTC GCAGAAGTAT TGATCACGGC GGGCGTACCC 
AAAGGCTCGT TTTACTACTA TTTCAAATCG AAGGAAGAAT TCGGTCAGGC GCTGCTGGAA 
GAGTATTTTT CCGAGTACCT GGGCCGGGTC GACGCCCTTA TGGCACGCCC CGGCACAGGC 
GCTGAACGGT TGCTGGCCTA TTTTATGTAC TGGTCAGAAA CCCAAGGCAC CGACCTGCCC 
GAAGGCAAAT GCCTGGTGGT CAAACTCGGC GCTGAAGTGT GCGATCTGTC CGAGGACATG 
CGTTGCGTGC TGGAAGTCGG CACTGCAAAA ATCATCCAGC GCATCAGCGC CTGTGTCGAA 
ATGGGTGTAT CCGACGGCAG CATTCACCCC GAAGGCGATC ATCAGGGTTT CGCAGAATCG 
CTTTATCAAC TCTGGCTTGG CGCTTCCCTG CTGGTGAAGG TCAACAAGTC CACCGAGTCT 
TTCGATAAAG CGTTGAACAT GACCAAGCGC CTGCTCAAGT AG
 
Protein sequence
MKKPVHDMRQ HIIDVARSLM TNKGYTAVGL AEVLITAGVP KGSFYYYFKS KEEFGQALLE 
EYFSEYLGRV DALMARPGTG AERLLAYFMY WSETQGTDLP EGKCLVVKLG AEVCDLSEDM 
RCVLEVGTAK IIQRISACVE MGVSDGSIHP EGDHQGFAES LYQLWLGASL LVKVNKSTES 
FDKALNMTKR LLK