| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3072 |
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| Symbol | |
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| ID | 1184729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3454877 |
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| End bp | 3455776 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394432 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_792866 |
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| Protein GI | 28870247 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0709507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATG ACCTCGCACC GCATCTCGAC ATCGCCCTGC GCCATTCGCC ACCGGGCTTG
GCCGCGACGC CGATCCCACG GGTGGATATC TGCGTCGGCC AGGGCTTTAC CGAAAAGGCG
CCGTGCCTGT ATCGCTCAAT GATCTGCTTC ATCCTGCAAG GGTCGAAGCG CGTTGCGATC
AACGACAATC TTCTGAGCTA CGACAGCGAG CACTACCTGA TCAGCGCCCT GGACCTGCCT
TTGATCGGGC AGATTCTTGA TGCCGAAGAC GGGCAACCTT ATGTTGCGGT ATCGCTCGTG
CTGGACCCGG CCTTATTGGC GGTACTGGCG GCGAGCATGC CTGCGGTTCG CGAGCGGGAG
CAGAAAGGCA TTGGCATCAC GATCAACCCG ATGAGCGCGC CGCTGCGAGA CACCTTGCTG
CGCTTGTTGT CATTGCTCGA CACGCCTGAC GATATCCCGA TTCTGGCGCC CATGGTCGAA
CGGGAGTTGC TCTATCGTCT TCTTCAAGGG CCTCAAGGGC GGCTGTTGCG GCAGATTGCG
CAACCCGATG GCGCGCTGGG CAGCATTCGG CGAGCCGTTG CATGGATTAG GAATAACTAC
AATGCCCGGC TTCGTATTGA GGCGTTGTGT GACGCAAGCG GCATGAGCCG CGCTAGTCTG
CATCGCCATT TTCTGTCGAT GACGGGCCTT AGCCCCGTGC AGTATCAGAA ACAACTCAGA
TTGCAGGAAG CTCGCCAGCT GTTGCTGGCT GGCGAGCATC GCGCATCCGA CGTGGCGTTT
GCGGTCGGCT ATGAAAGCGC TTCGCAGTTC AGCCGCGAAT ACCTGCGGCA ATTCTGTGCA
TCGCCTGCCC GCGATGTGCG CGAGATAAGG CAGGCGATCG GCACGCCAAC AAGGGCGTAA
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| Protein sequence | MNNDLAPHLD IALRHSPPGL AATPIPRVDI CVGQGFTEKA PCLYRSMICF ILQGSKRVAI
NDNLLSYDSE HYLISALDLP LIGQILDAED GQPYVAVSLV LDPALLAVLA ASMPAVRERE
QKGIGITINP MSAPLRDTLL RLLSLLDTPD DIPILAPMVE RELLYRLLQG PQGRLLRQIA
QPDGALGSIR RAVAWIRNNY NARLRIEALC DASGMSRASL HRHFLSMTGL SPVQYQKQLR
LQEARQLLLA GEHRASDVAF AVGYESASQF SREYLRQFCA SPARDVREIR QAIGTPTRA
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