| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3059 |
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| Symbol | |
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| ID | 1184716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3439826 |
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| End bp | 3440791 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394419 |
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| Product | glycine betaine/L-proline ABC transporter, permease protein |
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| Protein accession | NP_792853 |
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| Protein GI | 28870234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.206387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGATT TCAGCTTTCT TGATCCGTTC CAATCCCTGA CTATCCCCCT CGGCCAATGG
GTCGAGGTAG TGCTCAATTA TATGGTCCAT AACTTTCGCG AGGTCTTCCG CTCCATACGC
TGGCCGGTTG ATCAGATCCT GAATGGTATC CAGGGTGGCC TGTTGTCGGT GCCGCCGACG
ATATTCATTA TTTTTGCCAC GCTCTTGGGC TGGCAGGTGG GCGGGAAAAA AGTCGGCGTT
ATGTGTTTTG TCACCCTCAC GCTGCTGGGG CTGATCGGCG TCTGGGCCGA TGCAATGACA
ACCCTGTCGC TGGTGCTCAC TTCACTGGTG TTCTGCGTGG TGATCGGGGT GCCATTGGGT
GTGCTCTGTG CACGCAGTGA CCGACTGGAA AGAGTGCTCC GGCCAGGACT GGATGCCATG
CAGACCTTGC CAGCGTTTGT TTATCTGGTG CCGGTGGTGA TGTTGTTTGG TATCGGCAAC
GTTCCCGGTG TGCTGGTCAC CATTATCTTT TCAGTCGCGC CGTTGGTACG CCTGACCAAT
CTGGGCATCC GGCAAGTGCC GGAAGACAAG GTCGAAGCTG CCCGAGCATT CGGCTGTACC
CGTCGGCAAA TGCTGTTCAA GGTGCAACTT CCGCTGGCGG CACCCACGAT CATGGCGGGC
CTGAACCAGG CGCTGATGTT GTCACTGTCC ATGGTGGTGA TCGCCTCGAT GATTTCCGTG
GGCGGTCTGG GGCTGATGGT CCTTCGCGGT ATCGGTCGAC TGGATATGGG CCTGGCAACG
GTCGGCGGTG TGGGGCTGGT CTTGCTGGCT ATCTTTCTTG ACCGGTTAAC CCAGGCCATG
GGCGAACGCA GTAATAAAGC GGTTAATGGA GAACATTGGT ACCAGACAGG GCCAGTCGGA
ATAGTGTTCA AACTTAAAAA GAAGACGGCT TCAACACCTG CCGGCGCACC GCTCAACGAC
AATTGA
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| Protein sequence | MSDFSFLDPF QSLTIPLGQW VEVVLNYMVH NFREVFRSIR WPVDQILNGI QGGLLSVPPT
IFIIFATLLG WQVGGKKVGV MCFVTLTLLG LIGVWADAMT TLSLVLTSLV FCVVIGVPLG
VLCARSDRLE RVLRPGLDAM QTLPAFVYLV PVVMLFGIGN VPGVLVTIIF SVAPLVRLTN
LGIRQVPEDK VEAARAFGCT RRQMLFKVQL PLAAPTIMAG LNQALMLSLS MVVIASMISV
GGLGLMVLRG IGRLDMGLAT VGGVGLVLLA IFLDRLTQAM GERSNKAVNG EHWYQTGPVG
IVFKLKKKTA STPAGAPLND N
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