| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3057 |
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| Symbol | |
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| ID | 1184714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3437310 |
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| End bp | 3438662 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394417 |
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| Product | MmgE/PrpD family protein |
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| Protein accession | NP_792851 |
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| Protein GI | 28870232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.315307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTT ATTCATTCAT TCAGCAATTA AAGTTTGGCG ATGCGCCGTC TGCGACTCGT
AAACGAATTG AAACCTGCTT GCTCGACATC ATTGGTGTCG CGGCCGCCGC CCGTGAAAAT
GGTACCAGCC GTATTCTCAA AGAGTTTGCG GTGGCCAATT ATGCAACGGG CGCACCCTGC
AGTCGGTTGT GGTTTGACGG CAGGTCTGTA CACCCACTGG GCGCTGGCTA CGCCGGAGGT
TTCAGCGTGG ATAGCCTGGA TGCCCATGAA GGCCACTTCA CCTCCAAAGG TCATGCGGGG
GCCACTGTTG TACCCGCGAT CATCGCGTTG ATCGACGCCT ATTGCGCCCA AGGCAAAAGT
ATCAGCGGCC AGGAGATGCT CTGCGTTTTG ATGATTGGTT ATGAGACTGC ATTAAGAGCC
GGTCGAGCGC TGATGGCCAC GGCGCCGGAA TATCACGCCT CGGGGGCTTT TTCCGGAATC
GGCGTGGTGT GCGCAGGGGC GCGGCTGCTC AAGCTGGATG AAGCCGCCTT TCACCATGCG
TTGGGAATTG CAGAGTATTT CGGTCCGCGC TGCCCGATGA TGCGCTTGGT GGATTTCCCT
TCCATGCTGC GCGACGCCCA TGGAGCCGGT GCCCATGCCG GGATTAATGC GTTGCTGATG
GCACAGGCCG GGGTCACCGG CGCTCCTGCC GCAACGGTGG AAAGCGCCGA AGTCGCCCGG
TTCTGGCAGA GCATGGGCGA CACCTGGGAA ATTGACGAGC AATACTTCAA ACCATGGCCA
GTCTGTCGCT GGGCACAGCC AGCATTGACC GCCATGACCG GCCTGCTGAA TCAGCATCCA
CAGATCACAG CGGAGCAGAT CGAGTCCATC CACATCCAGA CTTTCCATGA ATCGGTGCGG
TTGCAAGGGC ATACCCCGAA AAACGCCGAT GAGGCGCAGT ATGCGCTGGC GTTTCCGGTC
GCTGCGCTGG TGGCACGTGG GCGTATCGGC CCTGAGGAGG TCACCGGTGC AGCCATACAT
GCAGCGGATA TTCTGAAGGT CAGCGCAAAG GTCCGCATCT CCGAGGCTGC CGATCTGTCA
GCGCGGTTTC CCGAGGAGAT CCTGTCGCGC ATTAACGTTC AGCTCAAGGA CGGCTCCTCT
CTGAGCAGCC CGACGACCTG TGCCAAGGGC GACCCTGGCC ATCCGCTGTC TGACGTGGAG
TTCATCGAAA AATATCGATT TTTTTCAGAG CCGAGCCTGG GTGTGTCTCA CAGTCGTTTG
CTGGAACAGG CAGTTGCCAA CCTGGCGCAA GAGCCTGATT GTCAGCGGCT GCTGAGTCTT
CTGTTGTCGC CGGTTCAAAC CATCAACGCA TAA
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| Protein sequence | MSLYSFIQQL KFGDAPSATR KRIETCLLDI IGVAAAAREN GTSRILKEFA VANYATGAPC
SRLWFDGRSV HPLGAGYAGG FSVDSLDAHE GHFTSKGHAG ATVVPAIIAL IDAYCAQGKS
ISGQEMLCVL MIGYETALRA GRALMATAPE YHASGAFSGI GVVCAGARLL KLDEAAFHHA
LGIAEYFGPR CPMMRLVDFP SMLRDAHGAG AHAGINALLM AQAGVTGAPA ATVESAEVAR
FWQSMGDTWE IDEQYFKPWP VCRWAQPALT AMTGLLNQHP QITAEQIESI HIQTFHESVR
LQGHTPKNAD EAQYALAFPV AALVARGRIG PEEVTGAAIH AADILKVSAK VRISEAADLS
ARFPEEILSR INVQLKDGSS LSSPTTCAKG DPGHPLSDVE FIEKYRFFSE PSLGVSHSRL
LEQAVANLAQ EPDCQRLLSL LLSPVQTINA
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