| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3054 |
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| Symbol | |
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| ID | 1184711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3435263 |
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| End bp | 3435994 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394414 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_792848 |
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| Protein GI | 28870229 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.106955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATGT TCAGCAGCAC GCTGTTTGAA GGCAAGGTCG CGCTCGTCAG CGGCGGGACG
TCCGGGATTG GCCAAGCGAC CGCCGAGTAC CTGGCCCGGC ATGGCGCCAG GGTGGTGGCT
ATCGGCTTGG GCGCCGACGC GACAATCATC GCCGAGGGGG TTGAGCTCGA TCTTCGCGAG
GTTAACGTCA CCAACGATGA TGCGCTCAAA GGCGTGATCC AAAGCCTGGA CCGCCTGGAT
ATTCTGGTAC CGGCTGCAGG TGGCACCCTG GGCGAAAAGG AGATGGAGTG GGAGGCCTTC
AACCAGGTGT TGTCGGTTCA ACTCAATGCC GTTTACCGTC TCATCAACCT GGCGCATCCG
CTGCTGGCCA GGCAAGGTGG GTCGATCATT AACATCGCGT CGGTATTCTC CTACTTTGGC
GGGGGAAAAC TCGTGGCTTA CTCGGCAGCC AAAGGGGCGA TTGTCCAGAT CACTAAGTCC
CTGGCGGAGG CCTACGCTCC TGACAATATT CGCGTCAATG CCGTGGCGCC GGGGTGGATC
ACCCCCCCCC TGCTGGCGAA AATCGATGAT CAACCGAGGA TCGACCGCTT GCTGTCCCGC
ACGCCGATGA GGCGCTTCGG CAGTGCTGAA GAGGTCGCCA AGGTGATTGC CTTTCTGGCT
TCGGATGCGG CGTCATTTGT GACCGGCGTG GTGTTGCCGG TCGACGGTGG CTACCTGACG
AGCGCTATCT GA
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| Protein sequence | MTMFSSTLFE GKVALVSGGT SGIGQATAEY LARHGARVVA IGLGADATII AEGVELDLRE
VNVTNDDALK GVIQSLDRLD ILVPAAGGTL GEKEMEWEAF NQVLSVQLNA VYRLINLAHP
LLARQGGSII NIASVFSYFG GGKLVAYSAA KGAIVQITKS LAEAYAPDNI RVNAVAPGWI
TPPLLAKIDD QPRIDRLLSR TPMRRFGSAE EVAKVIAFLA SDAASFVTGV VLPVDGGYLT
SAI
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