| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3037 |
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| Symbol | |
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| ID | 1184694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3415757 |
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| End bp | 3417163 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394398 |
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| Product | transcriptional regulator, putative |
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| Protein accession | NP_792832 |
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| Protein GI | 28870213 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00850156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA ACGCCGATTT CGCCTATCAG GCGGTCTATC GCTACCTTGT GCAGTTGGTT
GATCAGGGGC AGGGCGAGTC GGCGCTCAAG ATGCCGTCGC TGCGTCATCT CGCCCAGCGC
CTGCGTGTAT CGATATCCAC GGTACAAAGT GCCTATTCGC TGCTGGAAAA AGAGGGGCGC
ATTTATTCCG TTGCCAAGTC GGGTTATTAC TCGGCACCGC GCAGCGCAGC TATTGAAGTG
CGGGCACGCT TTGACAGCGA CGGCGATCTT TTACAGATGC ACCATTACTA CGCTCGACGT
TCTGGCATGT CGTTGTTGAG CAGCGATGCG CCGACGCTGT TGCAGGCGCA GGAAAGTCCG
CTGCTGGCGA TGGAACACGA ACTGGTTCGG AATTATCCGC GCCCTCGGCA AGCTGATTTC
CAGCCTTTCG GCGAACTGCA ATTGCGCATC GCGCTGGCAG CCCGTTACAC CCGCGGTGCC
GAGCATTGTT GGCACGCCGA CAATGTTCAT GTCGCCCCTG ACGTACATGG CGCATTCAAG
GCCGTTATCG AAACCCTGGG GTTGCGCGGC GGTGCGGTAC TGGTCGAGTC GCCTTGCGCC
TGGGGCTTGC TGAGGTTGCT GCGGTCATTC GATATCCGGG TCATCGAATT ACCACTGGAC
GAGACCGGCA GCCTTGATCC AATACAACTT GAACGGCTGT TGCTGGAAAA TAACGTCGGC
CTTGTTGTAT TGCCTTCAAT GTTCAACTCA GTGCGAGGCA GTGTGCGACC GTTGTGCAAT
AGCCGGGCAG TGGCCAAAGT GCTTGACCGA CATCAGGTCT GGGTGCTGGA AAACGACAGC
CACGGGGCCT TGCAGTTTGC CGCCGATCAA ACCTGCCTGC GTCACTTGAT TGACCCGCAG
CGTCTGATCA TCATCGGTAC GTTCGAAAAA TGCCTTGGGC CTGAAGCCCC TTACGGTTAT
CTGCTGTGCA AGAACCTCGA CGCGCGGTGG CAGGCGTATT TCCTGCTGCG CGCCTTTGAA
CTGCCGCCCA CTCGTCAGCG AGCCATCGCC CGCTTGTGCA GCAGCGGCCG TTTGGACAAG
CACTTGGCTC AGTTACGAGA GGCGCTGGCT GGACACCTGC AATTGATGAT GCAGCACCTC
AATGAACACA CGGACGGATT GCTGCGTTAC GAGGTGCCCG AGGGTGGCTG CGGGATCTGG
GCCCGAAGCG TGTATCCGGT GGACATGCGG CAGGTCTTCA ACAGGCTGCT GGCCAAACGC
ATTGTCATCA CGCCCGGTGA GCTGTTCAGC CTGGAGAGCC TCTATGGGCA ACATCTATGG
ATCAGCTACG CGATTGACTG GAGTCGCGAT CCGGGCGAAC TGTTTAGCGC ACTGGCGCAG
GCATTACACC TGGCACGTCA GCCTTGA
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| Protein sequence | MKNNADFAYQ AVYRYLVQLV DQGQGESALK MPSLRHLAQR LRVSISTVQS AYSLLEKEGR
IYSVAKSGYY SAPRSAAIEV RARFDSDGDL LQMHHYYARR SGMSLLSSDA PTLLQAQESP
LLAMEHELVR NYPRPRQADF QPFGELQLRI ALAARYTRGA EHCWHADNVH VAPDVHGAFK
AVIETLGLRG GAVLVESPCA WGLLRLLRSF DIRVIELPLD ETGSLDPIQL ERLLLENNVG
LVVLPSMFNS VRGSVRPLCN SRAVAKVLDR HQVWVLENDS HGALQFAADQ TCLRHLIDPQ
RLIIIGTFEK CLGPEAPYGY LLCKNLDARW QAYFLLRAFE LPPTRQRAIA RLCSSGRLDK
HLAQLREALA GHLQLMMQHL NEHTDGLLRY EVPEGGCGIW ARSVYPVDMR QVFNRLLAKR
IVITPGELFS LESLYGQHLW ISYAIDWSRD PGELFSALAQ ALHLARQP
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