| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3030 |
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| Symbol | |
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| ID | 1184687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3406058 |
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| End bp | 3407122 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394391 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_792825 |
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| Protein GI | 28870206 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.175953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGTT ATATCCTGCG ACGCCTGCTG CTGATCATCC CTACCCTGCT GTGCATCCTG
CTGGTCAACT TTTTCATCGT CCAGGCCGCG CCGGGCGGTC CTGTTGAACA AGCTATTGCG
CGCCTGCAGG GTATCGGCGG TGCAACCGTC GGCGCGGGGG CCACGGAATC GGCCGGCGCT
GGACACTCTC GCGCCTCCCG AGGGCTGGAC CCGGTGCTGA TAAAGCAAAT CGAACGTCAA
TACGGCTTCG ATAAACCGCT GCATGAACGC CTATGGCTGA TGCTGAAAAG CTATGCACGA
CTGGATTTCG GCAGCAGCTT CTTTCGCGGC GCGACGGTCA CCGATCTTAT TCTGCAAAAG
CTGCCGGTTT CCATCTCGCT GGGGTTGTGG GCGACGCTGT TGACCTACCT GGTATCGATT
CCGCTGGGCA TTCGCAAGGC GGTCAAACAT GGCAGCCAGT TCGATATCTG GAGCAGCACC
GCGATCATCA TCGGCTACGC CACGCCGGCG TTTCTGTTCG CCATGCTGCT AGTGGTGGTG
TTCTGCGGTG GCACGTCGCT GAACTGGTTT CCGGTACGCG GGCTGGTGTC GGACAACTTC
GAGCAACTGA GCACGCTGGG CAAGGTCGCC GACTATTTCT GGCACTTGGT GCTACCGGTT
TCAGCGCTGG TGATCGGCGG CTTTGCCACA CTGACGCTGC TGACCAAGCA TTCTTTCCTC
AATGAAATCA CCCGCCAGTA CGTGACCACG GCCCGCGCCA AGGGCATGAG CGAGCGACGT
GTGCTGTACG GGCATGTGTT TCGCAACGCC ATGCTGCTGG TGGTCTCAGG CATTCCGCAG
GCGTTCATCA GCGTATTTTT TGCCGGTTCA TTGCTGATCG AGGTGATTTT CTCGCTGGAT
GGGCTGGGGC GCATGAGTTA CGAAGCGGCC GTCTCGCGGG ATTACCCGGT GGTATTTGGT
TCGTTGTTTA TCTTCACCGT GTTTGGCCTG CTGATAAAAC TGATCGGTGA TGTCTGTTAC
ACGCTGGTTG ATCCGCGAAT CGACTTCAGC GCGAGGAATG CCTGA
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| Protein sequence | MLGYILRRLL LIIPTLLCIL LVNFFIVQAA PGGPVEQAIA RLQGIGGATV GAGATESAGA
GHSRASRGLD PVLIKQIERQ YGFDKPLHER LWLMLKSYAR LDFGSSFFRG ATVTDLILQK
LPVSISLGLW ATLLTYLVSI PLGIRKAVKH GSQFDIWSST AIIIGYATPA FLFAMLLVVV
FCGGTSLNWF PVRGLVSDNF EQLSTLGKVA DYFWHLVLPV SALVIGGFAT LTLLTKHSFL
NEITRQYVTT ARAKGMSERR VLYGHVFRNA MLLVVSGIPQ AFISVFFAGS LLIEVIFSLD
GLGRMSYEAA VSRDYPVVFG SLFIFTVFGL LIKLIGDVCY TLVDPRIDFS ARNA
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